Analysis of interatomic Contacts of Structural Units in PDB entry:
8K7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K7T entry

There are 6 chains in PDB entry 8K7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24LYS 237
G
 PRO 22ARG 58
H
 GLY 20ASP 62
B
 GLN 40LEU 199
E
 ASP 98SER 412
F
 ASP 98SER 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8K7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 56Right-handed 310
Helix 2
AA2
A
135 137Right-handed 310
Helix 3
AA3
A
165 169Right-handed 310
Helix 4
AA4
A
200 205Right-handed alpha
Helix 5
AA5
A
205 236Right-handed alpha
Helix 6
AA6
G
23 58Right-handed alpha
Helix 7
AA7
H
21 62Right-handed alpha
Helix 8
AA8
B
41 75Right-handed alpha
Helix 9
AA9
B
91 112Right-handed alpha
Helix 10
AB1
B
117 154Right-handed alpha
Helix 11
AB2
B
160 199Right-handed alpha
Helix 12
AB3
E
168 174Right-handed alpha
Helix 13
AB4
E
212 218Right-handed alpha
Helix 14
AB5
E
273 280Right-handed alpha
Helix 15
AB6
F
169 174Right-handed alpha
Helix 16
AB7
F
212 218Right-handed alpha
Helix 17
AB8
F
273 280Right-handed alpha
Helix 18
AB9
F
381 386Right-handed alpha
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There are 19 sheets in PDB entry 8K7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
76 79anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
103 108parallel
Strand 3
A
88 94anti-parallel
Strand 4
A
61 65anti-parallel
Strand 5
A
68 69anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
129 133anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
188 192parallel
Strand 3
A
170 178anti-parallel
Strand 4
A
139 146anti-parallel
Strand 5
A
149 154anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
188 192parallel
Strand 3
A
170 178anti-parallel
Strand 4
A
181 184anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
161 164anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
100 105first strand
Strand 2
E
117 127anti-parallel
Strand 3
E
158 167anti-parallel
Strand 4
E
148 155anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
140 141first strand
Strand 2
E
133 137anti-parallel
Strand 3
E
179 184anti-parallel
Strand 4
E
187 189anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
208 209first strand
Strand 2
E
224 231anti-parallel
Strand 3
E
264 270anti-parallel
Strand 4
E
253 257anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
238 243first strand
Strand 2
E
283 288anti-parallel
Strand 3
E
296 299anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
311 315first strand
Strand 2
E
326 335anti-parallel
Strand 3
E
371 379anti-parallel
Strand 4
E
357 358anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
311 315first strand
Strand 2
E
326 335anti-parallel
Strand 3
E
371 379anti-parallel
Strand 4
E
362 363anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
341 344first strand
Strand 2
E
389 395anti-parallel
Strand 3
E
405 410anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 105first strand
Strand 2
F
116 124anti-parallel
Strand 3
F
160 168anti-parallel
Strand 4
F
150 151anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
134 136first strand
Strand 2
F
178 184anti-parallel
Strand 3
F
187 193anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
205 209first strand
Strand 2
F
223 231anti-parallel
Strand 3
F
264 271anti-parallel
Strand 4
F
255 258anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
238 243first strand
Strand 2
F
283 288anti-parallel
Strand 3
F
296 297anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
311 315first strand
Strand 2
F
325 333anti-parallel
Strand 3
F
373 380anti-parallel
Strand 4
F
356 358anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
349 350first strand
Strand 2
F
344 346anti-parallel
Strand 3
F
390 395anti-parallel
Strand 4
F
404 409anti-parallel
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