Analysis of interatomic Contacts of Structural Units in PDB entry:
8KBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KBW entry

There are 6 chains in PDB entry 8KBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 81ILE 767
C
 THR 80ILE 767
E
 THR 80ILE 767
D
 THR 80ILE 767
F
 THR 80ILE 767
A
 THR 79ILE 767
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are224 helices in PDB entry 8KBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
81 93Right-handed alpha
Helix 2
AA2
B
102 111Right-handed alpha
Helix 3
AA3
B
123 133Right-handed alpha
Helix 4
AA4
B
147 163Right-handed alpha
Helix 5
AA5
B
168 182Right-handed alpha
Helix 6
AA6
B
197 202Right-handed alpha
Helix 7
AA7
B
202 211Right-handed alpha
Helix 8
AA8
B
220 235Right-handed alpha
Helix 9
AA9
B
238 243Right-handed alpha
Helix 10
AB1
B
247 252Right-handed 310
Helix 11
AB2
B
260 265Right-handed alpha
Helix 12
AB3
B
266 268Right-handed 310
Helix 13
AB4
B
277 288Right-handed alpha
Helix 14
AB5
B
290 305Right-handed alpha
Helix 15
AB6
B
314 329Right-handed alpha
Helix 16
AB7
B
331 334Right-handed 310
Helix 17
AB8
B
335 349Right-handed alpha
Helix 18
AB9
B
365 379Right-handed alpha
Helix 19
AC1
B
384 390Right-handed 310
Helix 20
AC2
B
408 421Right-handed alpha
Helix 21
AC3
B
427 446Right-handed alpha
Helix 22
AC4
B
459 470Right-handed alpha
Helix 23
AC5
B
471 475Right-handed 310
Helix 24
AC6
B
476 486Right-handed alpha
Helix 25
AC7
B
489 493Right-handed 310
Helix 26
AC8
B
508 539Right-handed alpha
Helix 27
AC9
B
549 565Right-handed alpha
Helix 28
AD1
B
570 593Right-handed alpha
Helix 29
AD2
B
596 600Right-handed 310
Helix 30
AD3
B
607 611Right-handed 310
Helix 31
AD4
B
617 637Right-handed alpha
Helix 32
AD5
B
642 657Right-handed alpha
Helix 33
AD6
B
666 694Right-handed alpha
Helix 34
AD7
B
699 723Right-handed alpha
Helix 35
AD8
B
729 748Right-handed alpha
Helix 36
AD9
B
750 763Right-handed alpha
Helix 37
AE1
C
81 93Right-handed alpha
Helix 38
AE2
C
102 108Right-handed alpha
Helix 39
AE3
C
125 133Right-handed alpha
Helix 40
AE4
C
147 163Right-handed alpha
Helix 41
AE5
C
168 183Right-handed alpha
Helix 42
AE6
C
197 202Right-handed alpha
Helix 43
AE7
C
202 207Right-handed alpha
Helix 44
AE8
C
222 226Right-handed 310
Helix 45
AE9
C
238 243Right-handed alpha
Helix 46
AF1
C
247 252Right-handed 310
Helix 47
AF2
C
260 268Right-handed 310
Helix 48
AF3
C
277 287Right-handed alpha
Helix 49
AF4
C
290 304Right-handed alpha
Helix 50
AF5
C
314 329Right-handed alpha
Helix 51
AF6
C
330 334Right-handed 310
Helix 52
AF7
C
335 349Right-handed alpha
Helix 53
AF8
C
365 379Right-handed alpha
Helix 54
AF9
C
384 390Right-handed 310
Helix 55
AG1
C
409 421Right-handed alpha
Helix 56
AG2
C
427 444Right-handed alpha
Helix 57
AG3
C
459 470Right-handed alpha
Helix 58
AG4
C
471 475Right-handed 310
Helix 59
AG5
C
476 486Right-handed alpha
Helix 60
AG6
C
489 493Right-handed 310
Helix 61
AG7
C
508 540Right-handed alpha
Helix 62
AG8
C
541 545Right-handed 310
Helix 63
AG9
C
550 565Right-handed alpha
Helix 64
AH1
C
570 595Right-handed alpha
Helix 65
AH2
C
596 600Right-handed 310
Helix 66
AH3
C
604 611Right-handed 310
Helix 67
AH4
C
616 636Right-handed alpha
Helix 68
AH5
C
642 658Right-handed alpha
Helix 69
AH6
C
666 694Right-handed alpha
Helix 70
AH7
C
699 723Right-handed alpha
Helix 71
AH8
C
729 748Right-handed alpha
Helix 72
AH9
C
750 763Right-handed alpha
Helix 73
AI1
E
81 93Right-handed alpha
Helix 74
AI2
E
102 111Right-handed alpha
Helix 75
AI3
E
123 132Right-handed alpha
Helix 76
AI4
E
147 163Right-handed alpha
Helix 77
AI5
E
164 166Right-handed 310
Helix 78
AI6
E
168 183Right-handed alpha
Helix 79
AI7
E
184 189Right-handed 310
Helix 80
AI8
E
197 211Right-handed alpha
Helix 81
AI9
E
220 237Right-handed alpha
Helix 82
AJ1
E
238 243Right-handed alpha
Helix 83
AJ2
E
247 252Right-handed 310
Helix 84
AJ3
E
264 268Right-handed 310
Helix 85
AJ4
E
277 287Right-handed alpha
Helix 86
AJ5
E
290 304Right-handed alpha
Helix 87
AJ6
E
314 329Right-handed alpha
Helix 88
AJ7
E
331 334Right-handed 310
Helix 89
AJ8
E
335 349Right-handed alpha
Helix 90
AJ9
E
365 379Right-handed alpha
Helix 91
AK1
E
384 390Right-handed 310
Helix 92
AK2
E
409 420Right-handed alpha
Helix 93
AK3
E
428 446Right-handed alpha
Helix 94
AK4
E
459 470Right-handed alpha
Helix 95
AK5
E
471 475Right-handed 310
Helix 96
AK6
E
476 486Right-handed alpha
Helix 97
AK7
E
489 493Right-handed 310
Helix 98
AK8
E
508 540Right-handed alpha
Helix 99
AK9
E
541 546Right-handed 310
Helix 100
AL1
E
550 565Right-handed alpha
Helix 101
AL2
E
570 595Right-handed alpha
Helix 102
AL3
E
596 600Right-handed 310
Helix 103
AL4
E
604 611Right-handed 310
Helix 104
AL5
E
616 635Right-handed alpha
Helix 105
AL6
E
642 658Right-handed alpha
Helix 106
AL7
E
666 696Right-handed alpha
Helix 107
AL8
E
699 723Right-handed alpha
Helix 108
AL9
E
729 748Right-handed alpha
Helix 109
AM1
E
750 763Right-handed alpha
Helix 110
AM2
D
81 93Right-handed alpha
Helix 111
AM3
D
102 111Right-handed alpha
Helix 112
AM4
D
123 133Right-handed alpha
Helix 113
AM5
D
147 165Right-handed alpha
Helix 114
AM6
D
168 183Right-handed alpha
Helix 115
AM7
D
184 189Right-handed 310
Helix 116
AM8
D
197 202Right-handed alpha
Helix 117
AM9
D
202 207Right-handed alpha
Helix 118
AN1
D
207 212Right-handed alpha
Helix 119
AN2
D
220 235Right-handed alpha
Helix 120
AN3
D
238 243Right-handed alpha
Helix 121
AN4
D
248 252Right-handed 310
Helix 122
AN5
D
264 268Right-handed 310
Helix 123
AN6
D
277 287Right-handed alpha
Helix 124
AN7
D
290 305Right-handed alpha
Helix 125
AN8
D
314 329Right-handed alpha
Helix 126
AN9
D
331 334Right-handed 310
Helix 127
AO1
D
335 349Right-handed alpha
Helix 128
AO2
D
365 379Right-handed alpha
Helix 129
AO3
D
384 392Right-handed 310
Helix 130
AO4
D
409 420Right-handed alpha
Helix 131
AO5
D
428 446Right-handed alpha
Helix 132
AO6
D
459 470Right-handed alpha
Helix 133
AO7
D
471 475Right-handed 310
Helix 134
AO8
D
476 486Right-handed alpha
Helix 135
AO9
D
489 493Right-handed 310
Helix 136
AP1
D
508 540Right-handed alpha
Helix 137
AP2
D
549 565Right-handed alpha
Helix 138
AP3
D
570 595Right-handed alpha
Helix 139
AP4
D
596 600Right-handed 310
Helix 140
AP5
D
604 611Right-handed 310
Helix 141
AP6
D
619 635Right-handed alpha
Helix 142
AP7
D
642 657Right-handed alpha
Helix 143
AP8
D
658 660Right-handed 310
Helix 144
AP9
D
666 696Right-handed alpha
Helix 145
AQ1
D
699 723Right-handed alpha
Helix 146
AQ2
D
729 748Right-handed alpha
Helix 147
AQ3
D
750 763Right-handed alpha
Helix 148
AQ4
F
81 93Right-handed alpha
Helix 149
AQ5
F
102 111Right-handed alpha
Helix 150
AQ6
F
123 131Right-handed alpha
Helix 151
AQ7
F
147 163Right-handed alpha
Helix 152
AQ8
F
168 183Right-handed alpha
Helix 153
AQ9
F
184 186Right-handed 310
Helix 154
AR1
F
197 202Right-handed alpha
Helix 155
AR2
F
202 211Right-handed alpha
Helix 156
AR3
F
221 230Right-handed alpha
Helix 157
AR4
F
248 252Right-handed 310
Helix 158
AR5
F
260 265Right-handed alpha
Helix 159
AR6
F
266 268Right-handed 310
Helix 160
AR7
F
277 288Right-handed alpha
Helix 161
AR8
F
290 305Right-handed alpha
Helix 162
AR9
F
314 329Right-handed alpha
Helix 163
AS1
F
331 334Right-handed 310
Helix 164
AS2
F
335 349Right-handed alpha
Helix 165
AS3
F
365 379Right-handed alpha
Helix 166
AS4
F
384 390Right-handed 310
Helix 167
AS5
F
409 420Right-handed alpha
Helix 168
AS6
F
428 443Right-handed alpha
Helix 169
AS7
F
459 470Right-handed alpha
Helix 170
AS8
F
471 475Right-handed 310
Helix 171
AS9
F
476 486Right-handed alpha
Helix 172
AT1
F
489 493Right-handed 310
Helix 173
AT2
F
508 540Right-handed alpha
Helix 174
AT3
F
552 565Right-handed alpha
Helix 175
AT4
F
570 593Right-handed alpha
Helix 176
AT5
F
596 600Right-handed 310
Helix 177
AT6
F
603 611Right-handed 310
Helix 178
AT7
F
614 618Right-handed 310
Helix 179
AT8
F
619 636Right-handed alpha
Helix 180
AT9
F
642 657Right-handed alpha
Helix 181
AU1
F
666 694Right-handed alpha
Helix 182
AU2
F
699 723Right-handed alpha
Helix 183
AU3
F
729 748Right-handed alpha
Helix 184
AU4
F
750 763Right-handed alpha
Helix 185
AU5
A
80 93Right-handed alpha
Helix 186
AU6
A
102 111Right-handed alpha
Helix 187
AU7
A
123 133Right-handed alpha
Helix 188
AU8
A
147 163Right-handed alpha
Helix 189
AU9
A
168 174Right-handed alpha
Helix 190
AV1
A
175 183Right-handed alpha
Helix 191
AV2
A
184 188Right-handed 310
Helix 192
AV3
A
197 202Right-handed alpha
Helix 193
AV4
A
202 213Right-handed alpha
Helix 194
AV5
A
220 232Right-handed alpha
Helix 195
AV6
A
233 236Right-handed 310
Helix 196
AV7
A
238 243Right-handed alpha
Helix 197
AV8
A
247 253Right-handed 310
Helix 198
AV9
A
260 265Right-handed alpha
Helix 199
AW1
A
266 268Right-handed 310
Helix 200
AW2
A
277 287Right-handed alpha
Helix 201
AW3
A
290 304Right-handed alpha
Helix 202
AW4
A
314 329Right-handed alpha
Helix 203
AW5
A
331 334Right-handed 310
Helix 204
AW6
A
335 350Right-handed alpha
Helix 205
AW7
A
365 379Right-handed alpha
Helix 206
AW8
A
384 390Right-handed 310
Helix 207
AW9
A
408 420Right-handed alpha
Helix 208
AX1
A
428 446Right-handed alpha
Helix 209
AX2
A
459 470Right-handed alpha
Helix 210
AX3
A
471 475Right-handed 310
Helix 211
AX4
A
476 486Right-handed alpha
Helix 212
AX5
A
489 493Right-handed 310
Helix 213
AX6
A
508 540Right-handed alpha
Helix 214
AX7
A
541 546Right-handed 310
Helix 215
AX8
A
549 565Right-handed alpha
Helix 216
AX9
A
570 595Right-handed alpha
Helix 217
AY1
A
596 600Right-handed 310
Helix 218
AY2
A
604 611Right-handed 310
Helix 219
AY3
A
617 636Right-handed alpha
Helix 220
AY4
A
642 659Right-handed alpha
Helix 221
AY5
A
666 695Right-handed alpha
Helix 222
AY6
A
699 723Right-handed alpha
Helix 223
AY7
A
729 748Right-handed alpha
Helix 224
AY8
A
750 763Right-handed alpha
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There are 11 sheets in PDB entry 8KBW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
392 393first strand
Strand 2
B
396 397anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
495 496first strand
Strand 2
B
500 501anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
392 393first strand
Strand 2
C
396 397anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
455 456first strand
Strand 2
C
494 496anti-parallel
Strand 3
C
500 501anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
392 393first strand
Strand 2
E
396 397anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
455 456first strand
Strand 2
E
494 496anti-parallel
Strand 3
E
500 501anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
455 456first strand
Strand 2
D
494 496anti-parallel
Strand 3
D
500 501anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
392 393first strand
Strand 2
F
396 397anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
455 456first strand
Strand 2
F
494 496anti-parallel
Strand 3
F
500 501anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 393first strand
Strand 2
A
396 397anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 456first strand
Strand 2
A
494 496anti-parallel
Strand 3
A
500 501anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il