Analysis of interatomic Contacts of Structural Units in PDB entry:
8KCK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KCK entry

There is 1 chain in PDB entry 8KCK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0GLU 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8KCK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 19Right-handed alpha
Helix 2
AA2
A
31 45Right-handed alpha
Helix 3
AA3
A
61 80Right-handed alpha
Helix 4
AA4
A
106 115Right-handed alpha
Helix 5
AA5
A
125 142Right-handed alpha
Helix 6
AA6
A
152 172Right-handed alpha
Helix 7
AA7
A
188 207Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8KCK.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 29first strand
Strand 2
A
178 184parallel
Strand 3
A
118 123parallel
Strand 4
A
146 151parallel
Strand 5
A
95 102anti-parallel
Strand 6
A
83 89anti-parallel
Strand 7
A
51 56parallel
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