Analysis of interatomic Contacts of Structural Units in PDB entry:
8KET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KET entry

There are 5 chains in PDB entry 8KET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 266
B
 MET 1ARG 267
F
 ALA 33PHE 288
H
 ALA 349ALA 351
C
 ARG 177GLU 723
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 8KET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 26Right-handed alpha
Helix 2
AA2
A
28 39Right-handed alpha
Helix 3
AA3
A
39 66Right-handed alpha
Helix 4
AA4
A
72 96Right-handed alpha
Helix 5
AA5
A
100 130Right-handed alpha
Helix 6
AA6
A
134 166Right-handed alpha
Helix 7
AA7
A
169 200Right-handed alpha
Helix 8
AA8
A
205 237Right-handed alpha
Helix 9
AA9
A
245 266Right-handed alpha
Helix 10
AB1
B
2 26Right-handed alpha
Helix 11
AB2
B
29 37Right-handed alpha
Helix 12
AB3
B
39 66Right-handed alpha
Helix 13
AB4
B
72 95Right-handed alpha
Helix 14
AB5
B
100 130Right-handed alpha
Helix 15
AB6
B
134 166Right-handed alpha
Helix 16
AB7
B
169 201Right-handed alpha
Helix 17
AB8
B
206 236Right-handed alpha
Helix 18
AB9
B
245 267Right-handed alpha
Helix 19
AC1
F
99 111Right-handed alpha
Helix 20
AC2
F
241 246Right-handed 310
Helix 21
AC3
F
271 286Right-handed alpha
Helix 22
AC4
C
178 197Right-handed alpha
Helix 23
AC5
C
199 216Right-handed alpha
Helix 24
AC6
C
218 232Right-handed alpha
Helix 25
AC7
C
238 253Right-handed alpha
Helix 26
AC8
C
254 268Right-handed alpha
Helix 27
AC9
C
274 288Right-handed alpha
Helix 28
AD1
C
292 304Right-handed alpha
Helix 29
AD2
C
310 329Right-handed alpha
Helix 30
AD3
C
341 348Right-handed alpha
Helix 31
AD4
C
362 370Right-handed alpha
Helix 32
AD5
C
372 385Right-handed alpha
Helix 33
AD6
C
393 408Right-handed alpha
Helix 34
AD7
C
409 423Right-handed alpha
Helix 35
AD8
C
430 445Right-handed alpha
Helix 36
AD9
C
446 460Right-handed alpha
Helix 37
AE1
C
466 481Right-handed alpha
Helix 38
AE2
C
482 495Right-handed alpha
Helix 39
AE3
C
502 516Right-handed alpha
Helix 40
AE4
C
518 532Right-handed alpha
Helix 41
AE5
C
538 551Right-handed alpha
Helix 42
AE6
C
557 568Right-handed alpha
Helix 43
AE7
C
571 585Right-handed alpha
Helix 44
AE8
C
587 599Right-handed alpha
Helix 45
AE9
C
609 623Right-handed alpha
Helix 46
AF1
C
627 640Right-handed alpha
Helix 47
AF2
C
646 660Right-handed alpha
Helix 48
AF3
C
663 677Right-handed alpha
Helix 49
AF4
C
683 698Right-handed alpha
Helix 50
AF5
C
701 723Right-handed alpha
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There are 5 sheets in PDB entry 8KET. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
43 46first strand
Strand 2
F
257 263parallel
Strand 3
F
76 83anti-parallel
Strand 4
F
60 70anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
122 125first strand
Strand 2
F
130 134anti-parallel
Strand 3
F
149 153anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
178 181first strand
Strand 2
F
184 187anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
189 193first strand
Strand 2
F
208 215anti-parallel
Strand 3
F
233 240parallel
Strand 4
F
222 228anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
198 199first strand
Strand 2
F
205 206anti-parallel
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