Analysis of interatomic Contacts of Structural Units in PDB entry:
8KEV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8KEV entry

There are 8 chains in PDB entry 8KEV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ALA 175	GLU 723
G	ALA 349	ALA 351
E	LEU 37	ARG 285
C	GLN 179	GLU 723
H	ALA 349	ALA 351
F	LEU 37	LEU 284
A	MET 1	ARG 266
B	MET 1	ARG 266

There are 71 helices in PDB entry 8KEV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	175	197	Right-handed alpha
Helix 2	AA2	D	199	216	Right-handed alpha
Helix 3	AA3	D	218	230	Right-handed alpha
Helix 4	AA4	D	238	253	Right-handed alpha
Helix 5	AA5	D	257	268	Right-handed alpha
Helix 6	AA6	D	274	288	Right-handed alpha
Helix 7	AA7	D	291	303	Right-handed alpha
Helix 8	AA8	D	311	333	Right-handed alpha
Helix 9	AA9	D	341	346	Right-handed alpha
Helix 10	AB1	D	460	481	Right-handed alpha
Helix 11	AB2	D	499	532	Right-handed alpha
Helix 12	AB3	D	539	552	Right-handed alpha
Helix 13	AB4	D	556	565	Right-handed alpha
Helix 14	AB5	D	566	570	Right-handed 310
Helix 15	AB6	D	575	585	Right-handed alpha
Helix 16	AB7	D	586	599	Right-handed alpha
Helix 17	AB8	D	606	610	Right-handed 310
Helix 18	AB9	D	611	623	Right-handed alpha
Helix 19	AC1	D	626	640	Right-handed alpha
Helix 20	AC2	D	646	662	Right-handed alpha
Helix 21	AC3	D	663	676	Right-handed alpha
Helix 22	AC4	D	684	698	Right-handed alpha
Helix 23	AC5	D	701	723	Right-handed alpha
Helix 24	AC6	E	104	110	Right-handed alpha
Helix 25	AC7	E	200	203	Right-handed 310
Helix 26	AC8	E	242	246	Right-handed 310
Helix 27	AC9	E	271	285	Right-handed alpha
Helix 28	AD1	C	180	197	Right-handed alpha
Helix 29	AD2	C	199	214	Right-handed alpha
Helix 30	AD3	C	215	217	Right-handed 310
Helix 31	AD4	C	218	230	Right-handed alpha
Helix 32	AD5	C	238	253	Right-handed alpha
Helix 33	AD6	C	254	267	Right-handed alpha
Helix 34	AD7	C	274	288	Right-handed alpha
Helix 35	AD8	C	291	303	Right-handed alpha
Helix 36	AD9	C	311	333	Right-handed alpha
Helix 37	AE1	C	462	483	Right-handed alpha
Helix 38	AE2	C	499	531	Right-handed alpha
Helix 39	AE3	C	538	541	Right-handed 310
Helix 40	AE4	C	542	551	Right-handed alpha
Helix 41	AE5	C	557	568	Right-handed alpha
Helix 42	AE6	C	570	585	Right-handed alpha
Helix 43	AE7	C	586	599	Right-handed alpha
Helix 44	AE8	C	609	624	Right-handed alpha
Helix 45	AE9	C	626	639	Right-handed alpha
Helix 46	AF1	C	646	662	Right-handed alpha
Helix 47	AF2	C	663	676	Right-handed alpha
Helix 48	AF3	C	684	698	Right-handed alpha
Helix 49	AF4	C	701	723	Right-handed alpha
Helix 50	AF5	F	104	111	Right-handed alpha
Helix 51	AF6	F	242	250	Right-handed 310
Helix 52	AF7	F	272	284	Right-handed alpha
Helix 53	AF8	A	2	26	Right-handed alpha
Helix 54	AF9	A	28	39	Right-handed alpha
Helix 55	AG1	A	39	65	Right-handed alpha
Helix 56	AG2	A	73	96	Right-handed alpha
Helix 57	AG3	A	103	128	Right-handed alpha
Helix 58	AG4	A	134	165	Right-handed alpha
Helix 59	AG5	A	170	201	Right-handed alpha
Helix 60	AG6	A	205	232	Right-handed alpha
Helix 61	AG7	A	233	235	Right-handed 310
Helix 62	AG8	A	245	266	Right-handed alpha
Helix 63	AG9	B	2	26	Right-handed alpha
Helix 64	AH1	B	28	39	Right-handed alpha
Helix 65	AH2	B	39	66	Right-handed alpha
Helix 66	AH3	B	72	95	Right-handed alpha
Helix 67	AH4	B	103	129	Right-handed alpha
Helix 68	AH5	B	134	166	Right-handed alpha
Helix 69	AH6	B	169	200	Right-handed alpha
Helix 70	AH7	B	205	237	Right-handed alpha
Helix 71	AH8	B	245	266	Right-handed alpha

There are 11 sheets in PDB entry 8KEV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	49	first strand
Strand 2	E	257	263	parallel
Strand 3	E	76	82	anti-parallel
Strand 4	E	61	70	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	122	126	first strand
Strand 2	E	130	134	anti-parallel
Strand 3	E	149	153	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	138	first strand
Strand 2	E	144	146	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	178	181	first strand
Strand 2	E	184	187	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	189	193	first strand
Strand 2	E	208	215	anti-parallel
Strand 3	E	233	240	parallel
Strand 4	E	226	230	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	198	199	first strand
Strand 2	E	205	206	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	43	46	first strand
Strand 2	F	257	263	parallel
Strand 3	F	76	80	anti-parallel
Strand 4	F	67	70	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	122	125	first strand
Strand 2	F	130	138	anti-parallel
Strand 3	F	144	153	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	181	first strand
Strand 2	F	184	187	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	199	first strand
Strand 2	F	205	206	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	208	214	first strand
Strand 2	F	233	239	parallel
Strand 3	F	222	230	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8KEV

Analysis of interatomic Contacts of Structural Units in PDB entry:
8KEV