Analysis of interatomic Contacts of Structural Units in PDB entry:
8KF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KF1 entry

There are 12 chains in PDB entry 8KF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 GLY 9ALA 42
F
 GLY 9ALA 42
H
 GLY 9ALA 42
A
 GLY 9ALA 42
I
 GLY 9ALA 42
B
 GLY 9ALA 42
J
 GLY 9ALA 42
C
 GLY 9ALA 42
K
 GLY 9ALA 42
D
 GLY 9ALA 42
L
 GLY 9ALA 42
E
 GLY 9ALA 42
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8KF1

There are 10 sheets in PDB entry 8KF1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
12 13first strand
Strand 2
J
12 13parallel
Strand 3
G
12 13parallel
Strand 4
H
12 13parallel
Strand 5
I
12 13parallel
Strand 6
L
12 13parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
24 25first strand
Strand 2
J
24 25parallel
Strand 3
G
24 25parallel
Strand 4
H
24 25parallel
Strand 5
I
24 25parallel
Strand 6
L
24 25parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
30 32first strand
Strand 2
J
30 32parallel
Strand 3
G
30 32parallel
Strand 4
H
30 32parallel
Strand 5
I
30 32parallel
Strand 6
L
30 32parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
35 36first strand
Strand 2
J
35 36parallel
Strand 3
G
35 36parallel
Strand 4
H
35 36parallel
Strand 5
I
35 36parallel
Strand 6
L
35 36parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
39 41first strand
Strand 2
J
39 41parallel
Strand 3
G
39 41parallel
Strand 4
H
39 41parallel
Strand 5
I
39 41parallel
Strand 6
L
39 41parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 13first strand
Strand 2
C
12 13parallel
Strand 3
F
12 13parallel
Strand 4
A
12 13parallel
Strand 5
B
12 13parallel
Strand 6
E
12 13parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 25first strand
Strand 2
C
24 25parallel
Strand 3
F
24 25parallel
Strand 4
A
24 25parallel
Strand 5
B
24 25parallel
Strand 6
E
24 25parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 32first strand
Strand 2
C
30 32parallel
Strand 3
F
30 32parallel
Strand 4
A
30 32parallel
Strand 5
B
30 32parallel
Strand 6
E
30 32parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 36first strand
Strand 2
C
35 36parallel
Strand 3
F
35 36parallel
Strand 4
A
35 36parallel
Strand 5
B
35 36parallel
Strand 6
E
35 36parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 41first strand
Strand 2
C
39 41parallel
Strand 3
F
39 41parallel
Strand 4
A
39 41parallel
Strand 5
B
39 41parallel
Strand 6
E
39 41parallel
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