Analysis of interatomic Contacts of Structural Units in PDB entry:
8KFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KFO entry

There are 2 chains in PDB entry 8KFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3ALA 583
B
 HIS 3ALA 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 66 helices in PDB entry 8KFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
79 85Right-handed alpha
Helix 6
AA6
A
86 93Right-handed 310
Helix 7
AA7
A
96 104Right-handed alpha
Helix 8
AA8
A
118 129Right-handed alpha
Helix 9
AA9
A
129 145Right-handed alpha
Helix 10
AB1
A
149 168Right-handed alpha
Helix 11
AB2
A
172 206Right-handed alpha
Helix 12
AB3
A
206 222Right-handed alpha
Helix 13
AB4
A
226 245Right-handed alpha
Helix 14
AB5
A
248 265Right-handed alpha
Helix 15
AB6
A
266 271Right-handed alpha
Helix 16
AB7
A
276 280Right-handed 310
Helix 17
AB8
A
281 291Right-handed alpha
Helix 18
AB9
A
304 309Right-handed alpha
Helix 19
AC1
A
313 321Right-handed alpha
Helix 20
AC2
A
321 337Right-handed alpha
Helix 21
AC3
A
341 360Right-handed alpha
Helix 22
AC4
A
364 370Right-handed alpha
Helix 23
AC5
A
371 382Right-handed alpha
Helix 24
AC6
A
383 414Right-handed alpha
Helix 25
AC7
A
418 437Right-handed alpha
Helix 26
AC8
A
443 466Right-handed alpha
Helix 27
AC9
A
469 479Right-handed alpha
Helix 28
AD1
A
482 489Right-handed alpha
Helix 29
AD2
A
503 507Right-handed 310
Helix 30
AD3
A
509 514Right-handed 310
Helix 31
AD4
A
516 535Right-handed alpha
Helix 32
AD5
A
539 558Right-handed alpha
Helix 33
AD6
A
562 582Right-handed alpha
Helix 34
AD7
B
5 15Right-handed alpha
Helix 35
AD8
B
15 31Right-handed alpha
Helix 36
AD9
B
35 56Right-handed alpha
Helix 37
AE1
B
65 76Right-handed alpha
Helix 38
AE2
B
79 85Right-handed alpha
Helix 39
AE3
B
86 93Right-handed 310
Helix 40
AE4
B
96 104Right-handed alpha
Helix 41
AE5
B
118 129Right-handed alpha
Helix 42
AE6
B
129 145Right-handed alpha
Helix 43
AE7
B
149 168Right-handed alpha
Helix 44
AE8
B
172 206Right-handed alpha
Helix 45
AE9
B
206 222Right-handed alpha
Helix 46
AF1
B
226 245Right-handed alpha
Helix 47
AF2
B
248 265Right-handed alpha
Helix 48
AF3
B
266 271Right-handed alpha
Helix 49
AF4
B
276 280Right-handed 310
Helix 50
AF5
B
281 291Right-handed alpha
Helix 51
AF6
B
303 309Right-handed alpha
Helix 52
AF7
B
313 321Right-handed alpha
Helix 53
AF8
B
321 337Right-handed alpha
Helix 54
AF9
B
341 360Right-handed alpha
Helix 55
AG1
B
364 370Right-handed alpha
Helix 56
AG2
B
371 382Right-handed alpha
Helix 57
AG3
B
383 414Right-handed alpha
Helix 58
AG4
B
418 437Right-handed alpha
Helix 59
AG5
B
444 466Right-handed alpha
Helix 60
AG6
B
469 479Right-handed alpha
Helix 61
AG7
B
482 489Right-handed alpha
Helix 62
AG8
B
503 507Right-handed 310
Helix 63
AG9
B
510 515Right-handed alpha
Helix 64
AH1
B
516 535Right-handed alpha
Helix 65
AH2
B
539 558Right-handed alpha
Helix 66
AH3
B
562 582Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8KFO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il