Analysis of interatomic Contacts of Structural Units in PDB entry:
8KG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KG1 entry

There are 4 chains in PDB entry 8KG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 152HIS 378
A
 ILE 380GLU 556
B
 PHE 156HIS 378
B
 ILE 380ASP 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 8KG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
157 163Right-handed alpha
Helix 2
AA2
A
164 169Right-handed 310
Helix 3
AA3
A
189 203Right-handed alpha
Helix 4
AA4
A
212 234Right-handed alpha
Helix 5
AA5
A
237 239Right-handed 310
Helix 6
AA6
A
246 263Right-handed alpha
Helix 7
AA7
A
276 279Right-handed 310
Helix 8
AA8
A
280 291Right-handed alpha
Helix 9
AA9
A
306 314Right-handed alpha
Helix 10
AB1
A
335 346Right-handed alpha
Helix 11
AB2
A
364 369Right-handed alpha
Helix 12
AB3
A
378 381Right-handed 310
Helix 13
AB4
A
392 398Right-handed alpha
Helix 14
AB5
A
423 427Right-handed 310
Helix 15
AB6
A
432 450Right-handed alpha
Helix 16
AB7
A
450 471Right-handed alpha
Helix 17
AB8
A
496 507Right-handed alpha
Helix 18
AB9
A
518 525Right-handed alpha
Helix 19
AC1
A
540 556Right-handed alpha
Helix 20
AC2
B
157 163Right-handed alpha
Helix 21
AC3
B
164 169Right-handed 310
Helix 22
AC4
B
189 203Right-handed alpha
Helix 23
AC5
B
212 234Right-handed alpha
Helix 24
AC6
B
237 239Right-handed 310
Helix 25
AC7
B
246 257Right-handed alpha
Helix 26
AC8
B
257 263Right-handed alpha
Helix 27
AC9
B
276 279Right-handed 310
Helix 28
AD1
B
280 291Right-handed alpha
Helix 29
AD2
B
306 313Right-handed alpha
Helix 30
AD3
B
335 346Right-handed alpha
Helix 31
AD4
B
364 369Right-handed alpha
Helix 32
AD5
B
378 381Right-handed 310
Helix 33
AD6
B
392 398Right-handed alpha
Helix 34
AD7
B
423 427Right-handed 310
Helix 35
AD8
B
432 450Right-handed alpha
Helix 36
AD9
B
450 471Right-handed alpha
Helix 37
AE1
B
496 507Right-handed alpha
Helix 38
AE2
B
518 525Right-handed alpha
Helix 39
AE3
B
540 557Right-handed alpha
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There are 12 sheets in PDB entry 8KG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
175 176anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
509 510parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 244first strand
Strand 2
A
387 391anti-parallel
Strand 3
A
372 376anti-parallel
Strand 4
A
349 353parallel
Strand 5
A
318 324parallel
Strand 6
A
268 272parallel
Strand 7
A
293 297parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 412first strand
Strand 2
A
417 419anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
489 492anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 514first strand
Strand 2
A
530 532anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
175 176anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
509 510parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 244first strand
Strand 2
B
387 391anti-parallel
Strand 3
B
372 376anti-parallel
Strand 4
B
349 353parallel
Strand 5
B
318 324parallel
Strand 6
B
268 272parallel
Strand 7
B
293 297parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
409 412first strand
Strand 2
B
417 419anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
475 478first strand
Strand 2
B
489 492anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
512 514first strand
Strand 2
B
530 532anti-parallel
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