Analysis of interatomic Contacts of Structural Units in PDB entry:
8KGI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8KGI entry

There are 2 chains in PDB entry 8KGI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 23LEU 571
B
 CYS 23LEU 571
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 8KGI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 29Right-handed 310
Helix 2
AA2
A
30 55Right-handed alpha
Helix 3
AA3
A
55 63Right-handed alpha
Helix 4
AA4
A
66 91Right-handed alpha
Helix 5
AA5
A
96 114Right-handed alpha
Helix 6
AA6
A
116 121Right-handed alpha
Helix 7
AA7
A
168 184Right-handed alpha
Helix 8
AA8
A
187 198Right-handed alpha
Helix 9
AA9
A
203 217Right-handed alpha
Helix 10
AB1
A
217 231Right-handed alpha
Helix 11
AB2
A
242 247Right-handed alpha
Helix 12
AB3
A
256 273Right-handed alpha
Helix 13
AB4
A
274 278Right-handed 310
Helix 14
AB5
A
310 324Right-handed alpha
Helix 15
AB6
A
325 358Right-handed alpha
Helix 16
AB7
A
363 390Right-handed alpha
Helix 17
AB8
A
396 412Right-handed alpha
Helix 18
AB9
A
412 420Right-handed alpha
Helix 19
AC1
A
515 544Right-handed alpha
Helix 20
AC2
A
545 547Right-handed 310
Helix 21
AC3
A
548 566Right-handed alpha
Helix 22
AC4
B
26 29Right-handed 310
Helix 23
AC5
B
30 55Right-handed alpha
Helix 24
AC6
B
55 63Right-handed alpha
Helix 25
AC7
B
66 91Right-handed alpha
Helix 26
AC8
B
96 114Right-handed alpha
Helix 27
AC9
B
116 121Right-handed alpha
Helix 28
AD1
B
168 184Right-handed alpha
Helix 29
AD2
B
187 198Right-handed alpha
Helix 30
AD3
B
203 216Right-handed alpha
Helix 31
AD4
B
217 231Right-handed alpha
Helix 32
AD5
B
242 247Right-handed alpha
Helix 33
AD6
B
256 273Right-handed alpha
Helix 34
AD7
B
274 278Right-handed 310
Helix 35
AD8
B
310 324Right-handed alpha
Helix 36
AD9
B
325 358Right-handed alpha
Helix 37
AE1
B
363 390Right-handed alpha
Helix 38
AE2
B
396 412Right-handed alpha
Helix 39
AE3
B
412 420Right-handed alpha
Helix 40
AE4
B
515 544Right-handed alpha
Helix 41
AE5
B
545 547Right-handed 310
Helix 42
AE6
B
548 566Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8KGI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il