Analysis of interatomic Contacts of Structural Units in PDB entry:
8OFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OFS entry

There are 3 chains in PDB entry 8OFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 183ASP 382
B
 ASN 183LYS 383
C
 ASN 183ASP 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8OFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
242 245Right-handed 310
Helix 2
AA2
A
287 291Right-handed 310
Helix 3
AA3
A
307 311Right-handed 310
Helix 4
AA4
A
314 316Right-handed 310
Helix 5
AA5
A
326 328Right-handed 310
Helix 6
AA6
A
343 347Right-handed 310
Helix 7
AA7
B
242 245Right-handed 310
Helix 8
AA8
B
287 291Right-handed 310
Helix 9
AA9
B
314 316Right-handed 310
Helix 10
AB1
B
326 328Right-handed 310
Helix 11
AB2
B
343 347Right-handed 310
Helix 12
AB3
C
242 245Right-handed 310
Helix 13
AB4
C
287 291Right-handed 310
Helix 14
AB5
C
307 311Right-handed 310
Helix 15
AB6
C
314 316Right-handed 310
Helix 16
AB7
C
326 328Right-handed 310
Helix 17
AB8
C
343 347Right-handed 310
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There are 6 sheets in PDB entry 8OFS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 279first strand
Strand 2
A
272 275anti-parallel
Strand 3
A
187 189anti-parallel
Strand 4
A
206 213anti-parallel
Strand 5
A
218 227anti-parallel
Strand 6
A
371 376anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 254first strand
Strand 2
A
349 356anti-parallel
Strand 3
A
332 339anti-parallel
Strand 4
A
318 324anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 279first strand
Strand 2
B
272 275anti-parallel
Strand 3
B
187 189anti-parallel
Strand 4
B
206 213anti-parallel
Strand 5
B
218 227anti-parallel
Strand 6
B
371 376anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 254first strand
Strand 2
B
349 356anti-parallel
Strand 3
B
332 339anti-parallel
Strand 4
B
318 324anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
278 279first strand
Strand 2
C
272 275anti-parallel
Strand 3
C
187 189anti-parallel
Strand 4
C
206 213anti-parallel
Strand 5
C
218 227anti-parallel
Strand 6
C
371 376anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 254first strand
Strand 2
C
349 356anti-parallel
Strand 3
C
332 339anti-parallel
Strand 4
C
318 324anti-parallel
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