Analysis of interatomic Contacts of Structural Units in PDB entry:
8OG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OG1 entry

There are 2 chains in PDB entry 8OG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 154ASN 605
A
 ALA 607ILE 919
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8OG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
170 175Right-handed alpha
Helix 2
AA2
A
178 183Right-handed alpha
Helix 3
AA3
A
184 188Right-handed 310
Helix 4
AA4
A
200 204Right-handed 310
Helix 5
AA5
A
205 210Right-handed alpha
Helix 6
AA6
A
211 224Right-handed alpha
Helix 7
AA7
A
231 235Right-handed 310
Helix 8
AA8
A
252 262Right-handed alpha
Helix 9
AA9
A
327 331Right-handed 310
Helix 10
AB1
A
375 390Right-handed alpha
Helix 11
AB2
A
417 426Right-handed alpha
Helix 12
AB3
A
444 457Right-handed alpha
Helix 13
AB4
A
477 481Right-handed 310
Helix 14
AB5
A
486 491Right-handed 310
Helix 15
AB6
A
492 500Right-handed alpha
Helix 16
AB7
A
501 520Right-handed alpha
Helix 17
AB8
A
522 538Right-handed alpha
Helix 18
AB9
A
591 597Right-handed alpha
Helix 19
AC1
A
599 606Right-handed alpha
Helix 20
AC2
A
626 630Right-handed 310
Helix 21
AC3
A
638 643Right-handed 310
Helix 22
AC4
A
646 652Right-handed alpha
Helix 23
AC5
A
672 682Right-handed alpha
Helix 24
AC6
A
724 730Right-handed 310
Helix 25
AC7
A
750 763Right-handed alpha
Helix 26
AC8
A
807 816Right-handed alpha
Helix 27
AC9
A
818 829Right-handed alpha
Helix 28
AD1
A
831 845Right-handed alpha
Helix 29
AD2
A
870 888Right-handed alpha
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There are 6 sheets in PDB entry 8OG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
237 243parallel
Strand 3
A
273 277parallel
Strand 4
A
297 300parallel
Strand 5
A
314 315parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
441 443anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 397first strand
Strand 2
A
341 346parallel
Strand 3
A
428 434parallel
Strand 4
A
460 464parallel
Strand 5
A
483 485parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 552first strand
Strand 2
A
715 719anti-parallel
Strand 3
A
689 696parallel
Strand 4
A
663 669parallel
Strand 5
A
739 744parallel
Strand 6
A
802 806anti-parallel
Strand 7
A
769 770anti-parallel
Strand 8
A
849 850parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 557first strand
Strand 2
A
707 708parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
784 788first strand
Strand 2
A
773 779anti-parallel
Strand 3
A
797 798anti-parallel
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