Analysis of interatomic Contacts of Structural Units in PDB entry:
8OGI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OGI entry

There are 2 chains in PDB entry 8OGI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 140ALA 243
B
 VAL 251THR 715
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8OGI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
198 207Right-handed alpha
Helix 2
AA2
A
210 214Right-handed 310
Helix 3
AA3
A
222 236Right-handed alpha
Helix 4
AA4
B
311 316Right-handed alpha
Helix 5
AA5
B
318 325Right-handed alpha
Helix 6
AA6
B
357 363Right-handed alpha
Helix 7
AA7
B
381 406Right-handed alpha
Helix 8
AA8
B
410 433Right-handed alpha
Helix 9
AA9
B
434 440Right-handed alpha
Helix 10
AB1
B
440 449Right-handed alpha
Helix 11
AB2
B
463 470Right-handed alpha
Helix 12
AB3
B
471 477Right-handed 310
Helix 13
AB4
B
500 502Right-handed 310
Helix 14
AB5
B
505 512Right-handed alpha
Helix 15
AB6
B
515 525Right-handed alpha
Helix 16
AB7
B
537 542Right-handed alpha
Helix 17
AB8
B
554 566Right-handed alpha
Helix 18
AB9
B
570 578Right-handed alpha
Helix 19
AC1
B
585 594Right-handed alpha
Helix 20
AC2
B
595 607Right-handed alpha
Helix 21
AC3
B
608 612Right-handed 310
Helix 22
AC4
B
613 621Right-handed alpha
Helix 23
AC5
B
630 647Right-handed alpha
Helix 24
AC6
B
659 667Right-handed alpha
Helix 25
AC7
B
670 679Right-handed alpha
Helix 26
AC8
B
702 704Right-handed 310
Helix 27
AC9
B
709 713Right-handed 310
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There are 6 sheets in PDB entry 8OGI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
B
302 303anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 221first strand
Strand 2
B
526 528anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
281 282anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
342 343first strand
Strand 2
B
346 347anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
480 482first strand
Strand 2
B
496 498anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
683 685first strand
Strand 2
B
698 700anti-parallel
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