Analysis of interatomic Contacts of Structural Units in PDB entry:
8OHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OHY entry

There is 1 chain in PDB entry 8OHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8OHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 52Right-handed alpha
Helix 2
AA2
A
53 56Right-handed 310
Helix 3
AA3
A
64 72Right-handed alpha
Helix 4
AA4
A
83 88Right-handed 310
Helix 5
AA5
A
107 123Right-handed alpha
Helix 6
AA6
A
138 142Right-handed 310
Helix 7
AA7
A
156 165Right-handed alpha
Helix 8
AA8
A
186 191Right-handed alpha
Helix 9
AA9
A
194 203Right-handed alpha
Helix 10
AB1
A
221 227Right-handed alpha
Helix 11
AB2
A
261 273Right-handed alpha
Helix 12
AB3
A
281 285Right-handed 310
Helix 13
AB4
A
299 306Right-handed alpha
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There are 4 sheets in PDB entry 8OHY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
99 105anti-parallel
Strand 3
A
13 21anti-parallel
Strand 4
A
127 136anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
251 259anti-parallel
Strand 3
A
176 185anti-parallel
Strand 4
A
287 289anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 245first strand
Strand 2
A
251 259anti-parallel
Strand 3
A
176 185anti-parallel
Strand 4
A
293 297anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
233 234anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il