Analysis of interatomic Contacts of Structural Units in PDB entry:
8OI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OI4 entry

There are 4 chains in PDB entry 8OI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 25LEU 413
B
 GLU 24LEU 413
C
 MET 23LEU 413
D
 GLU 24LEU 78
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8OI4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 47Right-handed alpha
Helix 2
AA2
A
49 54Right-handed alpha
Helix 3
AA3
A
68 87Right-handed alpha
Helix 4
AA4
A
93 115Right-handed alpha
Helix 5
AA5
A
128 144Right-handed alpha
Helix 6
AA6
A
144 149Right-handed alpha
Helix 7
AA7
A
153 167Right-handed alpha
Helix 8
AA8
A
168 170Right-handed 310
Helix 9
AA9
A
177 192Right-handed alpha
Helix 10
AB1
A
196 210Right-handed alpha
Helix 11
AB2
A
227 232Right-handed alpha
Helix 12
AB3
A
232 248Right-handed alpha
Helix 13
AB4
A
257 281Right-handed alpha
Helix 14
AB5
A
293 300Right-handed 310
Helix 15
AB6
A
301 310Right-handed alpha
Helix 16
AB7
A
318 334Right-handed alpha
Helix 17
AB8
A
335 340Right-handed 310
Helix 18
AB9
A
354 358Right-handed 310
Helix 19
AC1
A
363 379Right-handed 310
Helix 20
AC2
A
383 388Right-handed alpha
Helix 21
AC3
A
393 400Right-handed alpha
Helix 22
AC4
B
25 47Right-handed alpha
Helix 23
AC5
B
49 54Right-handed alpha
Helix 24
AC6
B
68 87Right-handed alpha
Helix 25
AC7
B
93 115Right-handed alpha
Helix 26
AC8
B
128 144Right-handed alpha
Helix 27
AC9
B
144 149Right-handed alpha
Helix 28
AD1
B
153 167Right-handed alpha
Helix 29
AD2
B
168 170Right-handed 310
Helix 30
AD3
B
177 192Right-handed alpha
Helix 31
AD4
B
196 210Right-handed alpha
Helix 32
AD5
B
227 232Right-handed alpha
Helix 33
AD6
B
232 250Right-handed alpha
Helix 34
AD7
B
257 281Right-handed alpha
Helix 35
AD8
B
293 300Right-handed 310
Helix 36
AD9
B
301 310Right-handed alpha
Helix 37
AE1
B
318 334Right-handed alpha
Helix 38
AE2
B
335 340Right-handed 310
Helix 39
AE3
B
354 358Right-handed 310
Helix 40
AE4
B
363 379Right-handed 310
Helix 41
AE5
B
383 388Right-handed alpha
Helix 42
AE6
B
393 400Right-handed alpha
Helix 43
AE7
C
25 47Right-handed alpha
Helix 44
AE8
C
49 54Right-handed alpha
Helix 45
AE9
C
68 87Right-handed alpha
Helix 46
AF1
C
93 115Right-handed alpha
Helix 47
AF2
C
128 144Right-handed alpha
Helix 48
AF3
C
144 149Right-handed alpha
Helix 49
AF4
C
153 167Right-handed alpha
Helix 50
AF5
C
168 170Right-handed 310
Helix 51
AF6
C
177 192Right-handed alpha
Helix 52
AF7
C
196 210Right-handed alpha
Helix 53
AF8
C
227 232Right-handed alpha
Helix 54
AF9
C
232 248Right-handed alpha
Helix 55
AG1
C
257 281Right-handed alpha
Helix 56
AG2
C
293 300Right-handed 310
Helix 57
AG3
C
301 310Right-handed alpha
Helix 58
AG4
C
318 334Right-handed alpha
Helix 59
AG5
C
335 340Right-handed 310
Helix 60
AG6
C
354 358Right-handed 310
Helix 61
AG7
C
363 379Right-handed 310
Helix 62
AG8
C
383 388Right-handed alpha
Helix 63
AG9
C
393 400Right-handed alpha
Helix 64
AH1
D
25 47Right-handed alpha
Helix 65
AH2
D
49 54Right-handed alpha
Helix 66
AH3
D
68 87Right-handed alpha
Helix 67
AH4
D
93 115Right-handed alpha
Helix 68
AH5
D
128 144Right-handed alpha
Helix 69
AH6
D
144 149Right-handed alpha
Helix 70
AH7
D
153 167Right-handed alpha
Helix 71
AH8
D
168 170Right-handed 310
Helix 72
AH9
D
177 191Right-handed alpha
Helix 73
AI1
D
196 210Right-handed alpha
Helix 74
AI2
D
227 232Right-handed alpha
Helix 75
AI3
D
232 248Right-handed alpha
Helix 76
AI4
D
257 281Right-handed alpha
Helix 77
AI5
D
293 300Right-handed 310
Helix 78
AI6
D
301 310Right-handed alpha
Helix 79
AI7
D
318 335Right-handed alpha
Helix 80
AI8
D
336 340Right-handed 310
Helix 81
AI9
D
354 358Right-handed 310
Helix 82
AJ1
D
363 379Right-handed 310
Helix 83
AJ2
D
383 388Right-handed alpha
Helix 84
AJ3
D
393 400Right-handed alpha
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There are 4 sheets in PDB entry 8OI4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
216 217anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
216 217anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 213first strand
Strand 2
C
216 217anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
211 213first strand
Strand 2
D
216 217anti-parallel
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