Analysis of interatomic Contacts of Structural Units in PDB entry:
8OIE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OIE entry

There are 10 chains in PDB entry 8OIE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	ALA 521
B	SER 5	TYR 115
C	VAL 5	TRP 460
D	THR 2	LEU 273
E	THR 2	LEU 273
F	PRO 2	ALA 521
G	SER 5	TYR 115
H	VAL 5	TRP 460
I	THR 2	LEU 273
J	THR 2	LEU 273

There are162 helices in PDB entry 8OIE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	10	Right-handed 310
Helix 2	AA2	A	12	17	Right-handed 310
Helix 3	AA3	A	49	55	Right-handed alpha
Helix 4	AA4	A	72	79	Right-handed alpha
Helix 5	AA5	A	91	96	Right-handed alpha
Helix 6	AA6	A	103	110	Right-handed alpha
Helix 7	AA7	A	111	126	Right-handed alpha
Helix 8	AA8	A	137	143	Right-handed alpha
Helix 9	AA9	A	146	159	Right-handed alpha
Helix 10	AB1	A	175	191	Right-handed alpha
Helix 11	AB2	A	215	227	Right-handed alpha
Helix 12	AB3	A	240	245	Right-handed alpha
Helix 13	AB4	A	246	250	Right-handed 310
Helix 14	AB5	A	257	273	Right-handed alpha
Helix 15	AB6	A	284	298	Right-handed alpha
Helix 16	AB7	A	300	327	Right-handed alpha
Helix 17	AB8	A	338	352	Right-handed alpha
Helix 18	AB9	A	364	375	Right-handed alpha
Helix 19	AC1	A	386	398	Right-handed alpha
Helix 20	AC2	A	405	414	Right-handed alpha
Helix 21	AC3	A	432	448	Right-handed alpha
Helix 22	AC4	A	449	456	Right-handed alpha
Helix 23	AC5	A	472	479	Right-handed alpha
Helix 24	AC6	A	482	487	Right-handed alpha
Helix 25	AC7	A	500	521	Right-handed alpha
Helix 26	AC8	B	7	19	Right-handed alpha
Helix 27	AC9	B	26	46	Right-handed alpha
Helix 28	AD1	B	54	75	Right-handed alpha
Helix 29	AD2	B	76	79	Right-handed 310
Helix 30	AD3	B	82	102	Right-handed alpha
Helix 31	AD4	B	107	112	Right-handed 310
Helix 32	AD5	C	20	30	Right-handed alpha
Helix 33	AD6	C	43	58	Right-handed alpha
Helix 34	AD7	C	69	76	Right-handed alpha
Helix 35	AD8	C	77	92	Right-handed alpha
Helix 36	AD9	C	103	109	Right-handed alpha
Helix 37	AE1	C	112	129	Right-handed alpha
Helix 38	AE2	C	147	164	Right-handed alpha
Helix 39	AE3	C	181	195	Right-handed alpha
Helix 40	AE4	C	205	209	Right-handed 310
Helix 41	AE5	C	225	232	Right-handed alpha
Helix 42	AE6	C	233	235	Right-handed 310
Helix 43	AE7	C	246	258	Right-handed alpha
Helix 44	AE8	C	269	285	Right-handed alpha
Helix 45	AE9	C	289	311	Right-handed alpha
Helix 46	AF1	C	321	335	Right-handed alpha
Helix 47	AF2	C	354	364	Right-handed alpha
Helix 48	AF3	C	374	384	Right-handed alpha
Helix 49	AF4	C	394	396	Right-handed 310
Helix 50	AF5	C	397	405	Right-handed alpha
Helix 51	AF6	C	420	424	Right-handed 310
Helix 52	AF7	C	427	451	Right-handed alpha
Helix 53	AF8	C	453	457	Right-handed 310
Helix 54	AF9	D	14	30	Right-handed alpha
Helix 55	AG1	D	46	51	Right-handed alpha
Helix 56	AG2	D	57	65	Right-handed alpha
Helix 57	AG3	D	66	70	Right-handed 310
Helix 58	AG4	D	80	82	Right-handed 310
Helix 59	AG5	D	97	112	Right-handed alpha
Helix 60	AG6	D	132	140	Right-handed 310
Helix 61	AG7	D	154	175	Right-handed alpha
Helix 62	AG8	D	191	204	Right-handed alpha
Helix 63	AG9	D	215	223	Right-handed alpha
Helix 64	AH1	D	226	231	Right-handed alpha
Helix 65	AH2	D	234	249	Right-handed alpha
Helix 66	AH3	D	260	268	Right-handed alpha
Helix 67	AH4	D	269	272	Right-handed 310
Helix 68	AH5	E	14	30	Right-handed alpha
Helix 69	AH6	E	46	51	Right-handed alpha
Helix 70	AH7	E	57	65	Right-handed alpha
Helix 71	AH8	E	80	82	Right-handed 310
Helix 72	AH9	E	97	112	Right-handed alpha
Helix 73	AI1	E	132	140	Right-handed 310
Helix 74	AI2	E	154	176	Right-handed alpha
Helix 75	AI3	E	191	204	Right-handed alpha
Helix 76	AI4	E	214	223	Right-handed alpha
Helix 77	AI5	E	226	231	Right-handed alpha
Helix 78	AI6	E	234	249	Right-handed alpha
Helix 79	AI7	E	260	268	Right-handed alpha
Helix 80	AI8	E	269	272	Right-handed 310
Helix 81	AI9	F	6	10	Right-handed 310
Helix 82	AJ1	F	12	17	Right-handed 310
Helix 83	AJ2	F	49	55	Right-handed alpha
Helix 84	AJ3	F	72	79	Right-handed alpha
Helix 85	AJ4	F	91	96	Right-handed alpha
Helix 86	AJ5	F	103	110	Right-handed alpha
Helix 87	AJ6	F	111	126	Right-handed alpha
Helix 88	AJ7	F	137	143	Right-handed alpha
Helix 89	AJ8	F	146	159	Right-handed alpha
Helix 90	AJ9	F	175	191	Right-handed alpha
Helix 91	AK1	F	212	214	Right-handed 310
Helix 92	AK2	F	215	227	Right-handed alpha
Helix 93	AK3	F	240	246	Right-handed alpha
Helix 94	AK4	F	247	250	Right-handed 310
Helix 95	AK5	F	257	273	Right-handed alpha
Helix 96	AK6	F	284	298	Right-handed alpha
Helix 97	AK7	F	300	327	Right-handed alpha
Helix 98	AK8	F	338	352	Right-handed alpha
Helix 99	AK9	F	364	375	Right-handed alpha
Helix 100	AL1	F	386	398	Right-handed alpha
Helix 101	AL2	F	405	414	Right-handed alpha
Helix 102	AL3	F	432	448	Right-handed alpha
Helix 103	AL4	F	449	456	Right-handed alpha
Helix 104	AL5	F	472	479	Right-handed alpha
Helix 105	AL6	F	482	487	Right-handed alpha
Helix 106	AL7	F	500	521	Right-handed alpha
Helix 107	AL8	G	8	19	Right-handed alpha
Helix 108	AL9	G	26	46	Right-handed alpha
Helix 109	AM1	G	54	75	Right-handed alpha
Helix 110	AM2	G	76	79	Right-handed 310
Helix 111	AM3	G	82	102	Right-handed alpha
Helix 112	AM4	G	107	112	Right-handed 310
Helix 113	AM5	H	20	30	Right-handed alpha
Helix 114	AM6	H	43	58	Right-handed alpha
Helix 115	AM7	H	69	75	Right-handed alpha
Helix 116	AM8	H	77	92	Right-handed alpha
Helix 117	AM9	H	103	109	Right-handed alpha
Helix 118	AN1	H	112	123	Right-handed alpha
Helix 119	AN2	H	123	129	Right-handed alpha
Helix 120	AN3	H	147	164	Right-handed alpha
Helix 121	AN4	H	181	196	Right-handed alpha
Helix 122	AN5	H	205	209	Right-handed 310
Helix 123	AN6	H	225	232	Right-handed alpha
Helix 124	AN7	H	233	235	Right-handed 310
Helix 125	AN8	H	246	258	Right-handed alpha
Helix 126	AN9	H	269	285	Right-handed alpha
Helix 127	AO1	H	289	311	Right-handed alpha
Helix 128	AO2	H	321	335	Right-handed alpha
Helix 129	AO3	H	350	353	Right-handed 310
Helix 130	AO4	H	354	364	Right-handed alpha
Helix 131	AO5	H	374	384	Right-handed alpha
Helix 132	AO6	H	394	396	Right-handed 310
Helix 133	AO7	H	397	405	Right-handed alpha
Helix 134	AO8	H	420	424	Right-handed 310
Helix 135	AO9	H	427	451	Right-handed alpha
Helix 136	AP1	H	453	457	Right-handed 310
Helix 137	AP2	I	14	30	Right-handed alpha
Helix 138	AP3	I	46	51	Right-handed alpha
Helix 139	AP4	I	57	65	Right-handed alpha
Helix 140	AP5	I	66	70	Right-handed 310
Helix 141	AP6	I	80	82	Right-handed 310
Helix 142	AP7	I	97	112	Right-handed alpha
Helix 143	AP8	I	132	140	Right-handed 310
Helix 144	AP9	I	154	175	Right-handed alpha
Helix 145	AQ1	I	191	204	Right-handed alpha
Helix 146	AQ2	I	215	223	Right-handed alpha
Helix 147	AQ3	I	226	231	Right-handed alpha
Helix 148	AQ4	I	234	249	Right-handed alpha
Helix 149	AQ5	I	260	268	Right-handed alpha
Helix 150	AQ6	I	269	272	Right-handed 310
Helix 151	AQ7	J	14	30	Right-handed alpha
Helix 152	AQ8	J	46	51	Right-handed alpha
Helix 153	AQ9	J	57	65	Right-handed alpha
Helix 154	AR1	J	80	82	Right-handed 310
Helix 155	AR2	J	97	112	Right-handed alpha
Helix 156	AR3	J	132	140	Right-handed 310
Helix 157	AR4	J	154	175	Right-handed alpha
Helix 158	AR5	J	191	204	Right-handed alpha
Helix 159	AR6	J	214	223	Right-handed alpha
Helix 160	AR7	J	226	231	Right-handed alpha
Helix 161	AR8	J	234	249	Right-handed alpha
Helix 162	AR9	J	260	268	Right-handed alpha

There are 16 sheets in PDB entry 8OIE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	21	first strand
Strand 2	A	380	383	anti-parallel
Strand 3	A	354	360	parallel
Strand 4	A	330	333	parallel
Strand 5	A	401	404	parallel
Strand 6	A	419	421	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	166	first strand
Strand 2	A	131	136	parallel
Strand 3	A	65	70	parallel
Strand 4	A	98	99	parallel
Strand 5	C	13	14	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	236	first strand
Strand 2	A	204	210	parallel
Strand 3	A	252	255	parallel
Strand 4	A	276	278	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	7	first strand
Strand 2	C	368	371	parallel
Strand 3	C	338	344	parallel
Strand 4	C	315	319	parallel
Strand 5	C	390	393	parallel
Strand 6	C	408	410	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	65	first strand
Strand 2	C	38	40	parallel
Strand 3	C	97	102	parallel
Strand 4	C	135	139	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	202	first strand
Strand 2	C	173	176	parallel
Strand 3	C	238	240	parallel
Strand 4	C	261	263	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	84	87	anti-parallel
Strand 3	D	34	39	parallel
Strand 4	D	121	126	parallel
Strand 5	D	3	9	parallel
Strand 6	D	146	151	parallel
Strand 7	D	178	185	parallel
Strand 8	D	207	211	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	78	first strand
Strand 2	E	84	87	anti-parallel
Strand 3	E	34	39	parallel
Strand 4	E	121	126	parallel
Strand 5	E	3	9	parallel
Strand 6	E	146	151	parallel
Strand 7	E	178	185	parallel
Strand 8	E	207	211	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	21	first strand
Strand 2	F	380	383	anti-parallel
Strand 3	F	354	360	parallel
Strand 4	F	330	333	parallel
Strand 5	F	401	404	parallel
Strand 6	F	419	421	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	162	166	first strand
Strand 2	F	131	136	parallel
Strand 3	F	65	70	parallel
Strand 4	F	98	99	parallel
Strand 5	H	13	14	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	230	236	first strand
Strand 2	F	204	210	parallel
Strand 3	F	252	255	parallel
Strand 4	F	276	278	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	7	first strand
Strand 2	H	368	371	parallel
Strand 3	H	338	344	parallel
Strand 4	H	315	319	parallel
Strand 5	H	390	393	parallel
Strand 6	H	408	410	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	64	65	first strand
Strand 2	H	38	40	parallel
Strand 3	H	97	102	parallel
Strand 4	H	135	139	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	199	202	first strand
Strand 2	H	173	176	parallel
Strand 3	H	238	240	parallel
Strand 4	H	261	263	parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	77	78	first strand
Strand 2	I	84	87	anti-parallel
Strand 3	I	34	39	parallel
Strand 4	I	121	126	parallel
Strand 5	I	3	9	parallel
Strand 6	I	146	151	parallel
Strand 7	I	178	185	parallel
Strand 8	I	207	211	parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	77	78	first strand
Strand 2	J	84	87	anti-parallel
Strand 3	J	34	39	parallel
Strand 4	J	121	126	parallel
Strand 5	J	3	9	parallel
Strand 6	J	146	151	parallel
Strand 7	J	178	185	parallel
Strand 8	J	207	211	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OIE

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OIE