Analysis of interatomic Contacts of Structural Units in PDB entry:
8OJF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OJF entry

There are 2 chains in PDB entry 8OJF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 31GLY 967
B
 TYR 33HIS 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8OJF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 71Right-handed alpha
Helix 2
AA2
A
72 85Right-handed alpha
Helix 3
AA3
A
87 119Right-handed alpha
Helix 4
AA4
A
138 149Right-handed alpha
Helix 5
AA5
A
153 163Right-handed alpha
Helix 6
AA6
A
179 197Right-handed alpha
Helix 7
AA7
A
202 222Right-handed alpha
Helix 8
AA8
A
232 242Right-handed alpha
Helix 9
AA9
A
247 266Right-handed alpha
Helix 10
AB1
A
296 326Right-handed alpha
Helix 11
AB2
A
332 345Right-handed alpha
Helix 12
AB3
A
365 391Right-handed alpha
Helix 13
AB4
A
397 401Right-handed 310
Helix 14
AB5
A
408 422Right-handed alpha
Helix 15
AB6
A
424 429Right-handed alpha
Helix 16
AB7
A
430 443Right-handed alpha
Helix 17
AB8
A
455 469Right-handed alpha
Helix 18
AB9
A
478 492Right-handed alpha
Helix 19
AC1
A
504 520Right-handed alpha
Helix 20
AC2
A
521 523Right-handed 310
Helix 21
AC3
A
535 549Right-handed alpha
Helix 22
AC4
A
563 580Right-handed alpha
Helix 23
AC5
A
580 587Right-handed alpha
Helix 24
AC6
A
599 604Right-handed alpha
Helix 25
AC7
A
605 627Right-handed alpha
Helix 26
AC8
A
640 644Right-handed 310
Helix 27
AC9
A
647 654Right-handed alpha
Helix 28
AD1
A
670 678Right-handed alpha
Helix 29
AD2
A
679 700Right-handed alpha
Helix 30
AD3
A
706 729Right-handed alpha
Helix 31
AD4
A
733 742Right-handed alpha
Helix 32
AD5
A
743 751Right-handed 310
Helix 33
AD6
A
769 780Right-handed alpha
Helix 34
AD7
A
783 788Right-handed alpha
Helix 35
AD8
A
789 801Right-handed alpha
Helix 36
AD9
A
802 815Right-handed alpha
Helix 37
AE1
A
815 831Right-handed alpha
Helix 38
AE2
A
833 845Right-handed alpha
Helix 39
AE3
A
849 872Right-handed alpha
Helix 40
AE4
A
883 909Right-handed alpha
Helix 41
AE5
A
934 939Right-handed 310
Helix 42
AE6
A
947 964Right-handed alpha
Helix 43
AE7
B
34 71Right-handed alpha
Helix 44
AE8
B
72 85Right-handed alpha
Helix 45
AE9
B
87 119Right-handed alpha
Helix 46
AF1
B
138 149Right-handed alpha
Helix 47
AF2
B
153 163Right-handed alpha
Helix 48
AF3
B
179 197Right-handed alpha
Helix 49
AF4
B
202 222Right-handed alpha
Helix 50
AF5
B
232 242Right-handed alpha
Helix 51
AF6
B
247 266Right-handed alpha
Helix 52
AF7
B
296 326Right-handed alpha
Helix 53
AF8
B
332 345Right-handed alpha
Helix 54
AF9
B
365 391Right-handed alpha
Helix 55
AG1
B
397 401Right-handed 310
Helix 56
AG2
B
408 422Right-handed alpha
Helix 57
AG3
B
424 429Right-handed alpha
Helix 58
AG4
B
430 443Right-handed alpha
Helix 59
AG5
B
455 469Right-handed alpha
Helix 60
AG6
B
478 492Right-handed alpha
Helix 61
AG7
B
504 520Right-handed alpha
Helix 62
AG8
B
521 523Right-handed 310
Helix 63
AG9
B
535 549Right-handed alpha
Helix 64
AH1
B
563 580Right-handed alpha
Helix 65
AH2
B
580 587Right-handed alpha
Helix 66
AH3
B
599 604Right-handed alpha
Helix 67
AH4
B
605 627Right-handed alpha
Helix 68
AH5
B
640 644Right-handed 310
Helix 69
AH6
B
647 654Right-handed alpha
Helix 70
AH7
B
670 678Right-handed alpha
Helix 71
AH8
B
679 700Right-handed alpha
Helix 72
AH9
B
706 729Right-handed alpha
Helix 73
AI1
B
733 742Right-handed alpha
Helix 74
AI2
B
743 751Right-handed 310
Helix 75
AI3
B
769 780Right-handed alpha
Helix 76
AI4
B
783 788Right-handed alpha
Helix 77
AI5
B
789 801Right-handed alpha
Helix 78
AI6
B
802 815Right-handed alpha
Helix 79
AI7
B
815 831Right-handed alpha
Helix 80
AI8
B
833 845Right-handed alpha
Helix 81
AI9
B
849 872Right-handed alpha
Helix 82
AJ1
B
889 909Right-handed alpha
Helix 83
AJ2
B
934 939Right-handed 310
Helix 84
AJ3
B
947 964Right-handed alpha
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There are 2 sheets in PDB entry 8OJF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 171first strand
Strand 2
A
279 283parallel
Strand 3
A
448 454parallel
Strand 4
A
525 531parallel
Strand 5
A
556 561parallel
Strand 6
A
590 596parallel
Strand 7
A
630 636parallel
Strand 8
A
663 669parallel
Strand 9
A
165 171parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 171first strand
Strand 2
B
279 283parallel
Strand 3
B
448 454parallel
Strand 4
B
525 531parallel
Strand 5
B
557 561parallel
Strand 6
B
590 596parallel
Strand 7
B
630 636parallel
Strand 8
B
663 669parallel
Strand 9
B
165 171parallel
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