Analysis of interatomic Contacts of Structural Units in PDB entry:
8OJG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OJG entry

There are 8 chains in PDB entry 8OJG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 37	TYR 152
B	GLU 37	TYR 152
C	THR 36	TYR 152
D	GLU 37	TYR 152
E	THR 36	TYR 152
F	ARG 35	TYR 152
G	GLN 24	GLN 203
H	GLN 24	GLU 208

There are 26 helices in PDB entry 8OJG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	142	152	Right-handed alpha
Helix 2	AA2	B	142	151	Right-handed alpha
Helix 3	AA3	C	142	150	Right-handed alpha
Helix 4	AA4	D	142	151	Right-handed alpha
Helix 5	AA5	E	144	150	Right-handed alpha
Helix 6	AA6	F	144	149	Right-handed alpha
Helix 7	AA7	G	26	45	Right-handed alpha
Helix 8	AA8	G	45	52	Right-handed alpha
Helix 9	AA9	G	55	64	Right-handed alpha
Helix 10	AB1	G	65	68	Right-handed 310
Helix 11	AB2	G	70	79	Right-handed alpha
Helix 12	AB3	G	86	110	Right-handed alpha
Helix 13	AB4	G	174	181	Right-handed alpha
Helix 14	AB5	G	182	189	Right-handed alpha
Helix 15	AB6	G	189	201	Right-handed alpha
Helix 16	AB7	H	26	40	Right-handed alpha
Helix 17	AB8	H	41	44	Right-handed 310
Helix 18	AB9	H	45	50	Right-handed alpha
Helix 19	AC1	H	55	64	Right-handed alpha
Helix 20	AC2	H	65	68	Right-handed 310
Helix 21	AC3	H	69	78	Right-handed alpha
Helix 22	AC4	H	86	105	Right-handed alpha
Helix 23	AC5	H	107	112	Right-handed 310
Helix 24	AC6	H	174	181	Right-handed alpha
Helix 25	AC7	H	182	189	Right-handed alpha
Helix 26	AC8	H	189	202	Right-handed alpha

There are 13 sheets in PDB entry 8OJG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	45	first strand
Strand 2	A	81	87	anti-parallel
Strand 3	A	63	72	anti-parallel
Strand 4	A	57	60	anti-parallel
Strand 5	A	110	115	parallel
Strand 6	A	98	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	45	first strand
Strand 2	B	80	87	anti-parallel
Strand 3	B	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	103	first strand
Strand 2	B	110	115	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	45	first strand
Strand 2	C	80	87	anti-parallel
Strand 3	C	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	110	115	parallel
Strand 3	C	98	103	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	45	first strand
Strand 2	D	80	87	anti-parallel
Strand 3	D	63	73	anti-parallel
Strand 4	D	57	60	anti-parallel
Strand 5	D	111	114	parallel
Strand 6	D	99	102	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	45	first strand
Strand 2	E	80	86	anti-parallel
Strand 3	E	64	73	anti-parallel
Strand 4	E	57	59	anti-parallel
Strand 5	E	111	115	parallel
Strand 6	E	98	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	39	45	first strand
Strand 2	F	80	87	anti-parallel
Strand 3	F	63	73	anti-parallel
Strand 4	F	57	60	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	103	104	first strand
Strand 2	F	108	110	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	119	first strand
Strand 2	G	135	139	anti-parallel
Strand 3	G	143	146	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	130	131	first strand
Strand 2	G	152	154	anti-parallel
Strand 3	G	161	163	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	116	119	first strand
Strand 2	H	135	138	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	130	132	first strand
Strand 2	H	151	153	anti-parallel
Strand 3	H	162	163	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OJG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OJG