Analysis of interatomic Contacts of Structural Units in PDB entry:
8OJL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OJL entry

There are 6 chains in PDB entry 8OJL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 123	ASP 949
B	HIS 123	ASP 949
C	HIS 123	ASP 949
D	HIS 123	ASP 949
E	HIS 123	ASP 949
F	HIS 123	ASP 949

There are197 helices in PDB entry 8OJL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	147	156	Right-handed alpha
Helix 2	AA2	A	174	181	Right-handed alpha
Helix 3	AA3	A	290	307	Right-handed alpha
Helix 4	AA4	A	312	318	Right-handed alpha
Helix 5	AA5	A	319	323	Right-handed 310
Helix 6	AA6	A	327	338	Right-handed alpha
Helix 7	AA7	A	342	352	Right-handed alpha
Helix 8	AA8	A	354	407	Right-handed alpha
Helix 9	AA9	A	416	427	Right-handed alpha
Helix 10	AB1	A	432	448	Right-handed alpha
Helix 11	AB2	A	452	468	Right-handed alpha
Helix 12	AB3	A	479	491	Right-handed alpha
Helix 13	AB4	A	494	511	Right-handed alpha
Helix 14	AB5	A	528	541	Right-handed alpha
Helix 15	AB6	A	555	560	Right-handed alpha
Helix 16	AB7	A	571	581	Right-handed alpha
Helix 17	AB8	A	591	595	Right-handed 310
Helix 18	AB9	A	603	612	Right-handed alpha
Helix 19	AC1	A	614	619	Right-handed 310
Helix 20	AC2	A	646	651	Right-handed alpha
Helix 21	AC3	A	662	673	Right-handed alpha
Helix 22	AC4	A	674	682	Right-handed alpha
Helix 23	AC5	A	692	704	Right-handed alpha
Helix 24	AC6	A	709	729	Right-handed alpha
Helix 25	AC7	A	738	747	Right-handed alpha
Helix 26	AC8	A	807	829	Right-handed alpha
Helix 27	AC9	A	849	855	Right-handed 310
Helix 28	AD1	A	856	870	Right-handed alpha
Helix 29	AD2	A	894	906	Right-handed alpha
Helix 30	AD3	A	916	922	Right-handed alpha
Helix 31	AD4	A	924	928	Right-handed 310
Helix 32	AD5	A	938	944	Right-handed alpha
Helix 33	AD6	B	147	156	Right-handed alpha
Helix 34	AD7	B	174	181	Right-handed alpha
Helix 35	AD8	B	290	307	Right-handed alpha
Helix 36	AD9	B	312	318	Right-handed alpha
Helix 37	AE1	B	319	323	Right-handed 310
Helix 38	AE2	B	327	338	Right-handed alpha
Helix 39	AE3	B	342	352	Right-handed alpha
Helix 40	AE4	B	354	389	Right-handed alpha
Helix 41	AE5	B	391	404	Right-handed alpha
Helix 42	AE6	B	407	412	Right-handed alpha
Helix 43	AE7	B	416	427	Right-handed alpha
Helix 44	AE8	B	431	448	Right-handed alpha
Helix 45	AE9	B	452	467	Right-handed alpha
Helix 46	AF1	B	479	491	Right-handed alpha
Helix 47	AF2	B	494	511	Right-handed alpha
Helix 48	AF3	B	528	541	Right-handed alpha
Helix 49	AF4	B	555	560	Right-handed alpha
Helix 50	AF5	B	571	581	Right-handed alpha
Helix 51	AF6	B	592	595	Right-handed 310
Helix 52	AF7	B	602	612	Right-handed alpha
Helix 53	AF8	B	614	619	Right-handed 310
Helix 54	AF9	B	646	652	Right-handed alpha
Helix 55	AG1	B	662	673	Right-handed alpha
Helix 56	AG2	B	673	682	Right-handed alpha
Helix 57	AG3	B	692	704	Right-handed alpha
Helix 58	AG4	B	709	729	Right-handed alpha
Helix 59	AG5	B	738	746	Right-handed alpha
Helix 60	AG6	B	807	829	Right-handed alpha
Helix 61	AG7	B	849	855	Right-handed 310
Helix 62	AG8	B	856	870	Right-handed alpha
Helix 63	AG9	B	894	905	Right-handed alpha
Helix 64	AH1	B	916	922	Right-handed alpha
Helix 65	AH2	B	925	929	Right-handed 310
Helix 66	AH3	B	938	944	Right-handed alpha
Helix 67	AH4	C	147	156	Right-handed alpha
Helix 68	AH5	C	174	181	Right-handed alpha
Helix 69	AH6	C	287	307	Right-handed alpha
Helix 70	AH7	C	312	318	Right-handed alpha
Helix 71	AH8	C	319	323	Right-handed 310
Helix 72	AH9	C	327	338	Right-handed alpha
Helix 73	AI1	C	342	352	Right-handed alpha
Helix 74	AI2	C	354	389	Right-handed alpha
Helix 75	AI3	C	391	405	Right-handed alpha
Helix 76	AI4	C	408	414	Right-handed 310
Helix 77	AI5	C	415	427	Right-handed alpha
Helix 78	AI6	C	431	448	Right-handed alpha
Helix 79	AI7	C	452	468	Right-handed alpha
Helix 80	AI8	C	479	491	Right-handed alpha
Helix 81	AI9	C	494	511	Right-handed alpha
Helix 82	AJ1	C	528	541	Right-handed alpha
Helix 83	AJ2	C	555	560	Right-handed alpha
Helix 84	AJ3	C	571	581	Right-handed alpha
Helix 85	AJ4	C	592	595	Right-handed 310
Helix 86	AJ5	C	602	612	Right-handed alpha
Helix 87	AJ6	C	615	619	Right-handed 310
Helix 88	AJ7	C	646	651	Right-handed alpha
Helix 89	AJ8	C	662	673	Right-handed alpha
Helix 90	AJ9	C	673	682	Right-handed alpha
Helix 91	AK1	C	692	703	Right-handed alpha
Helix 92	AK2	C	709	729	Right-handed alpha
Helix 93	AK3	C	738	747	Right-handed alpha
Helix 94	AK4	C	807	829	Right-handed alpha
Helix 95	AK5	C	849	855	Right-handed 310
Helix 96	AK6	C	856	870	Right-handed alpha
Helix 97	AK7	C	894	905	Right-handed alpha
Helix 98	AK8	C	916	922	Right-handed alpha
Helix 99	AK9	C	924	928	Right-handed 310
Helix 100	AL1	C	938	947	Right-handed alpha
Helix 101	AL2	D	147	156	Right-handed alpha
Helix 102	AL3	D	174	181	Right-handed alpha
Helix 103	AL4	D	289	307	Right-handed alpha
Helix 104	AL5	D	312	318	Right-handed alpha
Helix 105	AL6	D	319	323	Right-handed 310
Helix 106	AL7	D	327	338	Right-handed alpha
Helix 107	AL8	D	342	352	Right-handed alpha
Helix 108	AL9	D	354	407	Right-handed alpha
Helix 109	AM1	D	416	427	Right-handed alpha
Helix 110	AM2	D	432	448	Right-handed alpha
Helix 111	AM3	D	452	468	Right-handed alpha
Helix 112	AM4	D	479	491	Right-handed alpha
Helix 113	AM5	D	494	512	Right-handed alpha
Helix 114	AM6	D	528	541	Right-handed alpha
Helix 115	AM7	D	555	560	Right-handed alpha
Helix 116	AM8	D	571	581	Right-handed alpha
Helix 117	AM9	D	592	595	Right-handed 310
Helix 118	AN1	D	602	612	Right-handed alpha
Helix 119	AN2	D	614	619	Right-handed 310
Helix 120	AN3	D	646	651	Right-handed alpha
Helix 121	AN4	D	662	673	Right-handed alpha
Helix 122	AN5	D	673	683	Right-handed alpha
Helix 123	AN6	D	692	704	Right-handed alpha
Helix 124	AN7	D	709	729	Right-handed alpha
Helix 125	AN8	D	738	746	Right-handed alpha
Helix 126	AN9	D	807	829	Right-handed alpha
Helix 127	AO1	D	849	855	Right-handed 310
Helix 128	AO2	D	856	870	Right-handed alpha
Helix 129	AO3	D	894	906	Right-handed alpha
Helix 130	AO4	D	916	922	Right-handed alpha
Helix 131	AO5	D	938	947	Right-handed alpha
Helix 132	AO6	E	147	156	Right-handed alpha
Helix 133	AO7	E	157	159	Right-handed 310
Helix 134	AO8	E	174	181	Right-handed alpha
Helix 135	AO9	E	288	307	Right-handed alpha
Helix 136	AP1	E	312	318	Right-handed alpha
Helix 137	AP2	E	319	323	Right-handed 310
Helix 138	AP3	E	327	338	Right-handed alpha
Helix 139	AP4	E	342	352	Right-handed alpha
Helix 140	AP5	E	354	405	Right-handed alpha
Helix 141	AP6	E	414	427	Right-handed alpha
Helix 142	AP7	E	431	448	Right-handed alpha
Helix 143	AP8	E	452	468	Right-handed alpha
Helix 144	AP9	E	479	491	Right-handed alpha
Helix 145	AQ1	E	494	511	Right-handed alpha
Helix 146	AQ2	E	528	541	Right-handed alpha
Helix 147	AQ3	E	555	560	Right-handed alpha
Helix 148	AQ4	E	571	581	Right-handed alpha
Helix 149	AQ5	E	592	595	Right-handed 310
Helix 150	AQ6	E	602	612	Right-handed alpha
Helix 151	AQ7	E	614	619	Right-handed 310
Helix 152	AQ8	E	646	651	Right-handed alpha
Helix 153	AQ9	E	662	673	Right-handed alpha
Helix 154	AR1	E	673	683	Right-handed alpha
Helix 155	AR2	E	692	704	Right-handed alpha
Helix 156	AR3	E	709	729	Right-handed alpha
Helix 157	AR4	E	738	747	Right-handed alpha
Helix 158	AR5	E	807	829	Right-handed alpha
Helix 159	AR6	E	849	855	Right-handed 310
Helix 160	AR7	E	856	870	Right-handed alpha
Helix 161	AR8	E	894	906	Right-handed alpha
Helix 162	AR9	E	916	923	Right-handed alpha
Helix 163	AS1	E	924	929	Right-handed 310
Helix 164	AS2	E	938	947	Right-handed alpha
Helix 165	AS3	F	147	156	Right-handed alpha
Helix 166	AS4	F	174	181	Right-handed alpha
Helix 167	AS5	F	290	307	Right-handed alpha
Helix 168	AS6	F	312	318	Right-handed alpha
Helix 169	AS7	F	319	323	Right-handed 310
Helix 170	AS8	F	327	338	Right-handed alpha
Helix 171	AS9	F	342	352	Right-handed alpha
Helix 172	AT1	F	354	389	Right-handed alpha
Helix 173	AT2	F	391	410	Right-handed alpha
Helix 174	AT3	F	417	427	Right-handed alpha
Helix 175	AT4	F	431	448	Right-handed alpha
Helix 176	AT5	F	452	468	Right-handed alpha
Helix 177	AT6	F	479	491	Right-handed alpha
Helix 178	AT7	F	494	511	Right-handed alpha
Helix 179	AT8	F	528	541	Right-handed alpha
Helix 180	AT9	F	555	560	Right-handed alpha
Helix 181	AU1	F	571	581	Right-handed alpha
Helix 182	AU2	F	592	595	Right-handed 310
Helix 183	AU3	F	602	612	Right-handed alpha
Helix 184	AU4	F	614	619	Right-handed 310
Helix 185	AU5	F	646	651	Right-handed alpha
Helix 186	AU6	F	662	673	Right-handed alpha
Helix 187	AU7	F	673	683	Right-handed alpha
Helix 188	AU8	F	692	703	Right-handed alpha
Helix 189	AU9	F	709	730	Right-handed alpha
Helix 190	AV1	F	738	747	Right-handed alpha
Helix 191	AV2	F	807	829	Right-handed alpha
Helix 192	AV3	F	849	855	Right-handed 310
Helix 193	AV4	F	856	870	Right-handed alpha
Helix 194	AV5	F	894	906	Right-handed alpha
Helix 195	AV6	F	916	922	Right-handed alpha
Helix 196	AV7	F	924	928	Right-handed 310
Helix 197	AV8	F	938	944	Right-handed alpha

There are 39 sheets in PDB entry 8OJL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	142	first strand
Strand 2	A	206	208	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	164	first strand
Strand 2	A	185	193	anti-parallel
Strand 3	A	167	169	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	164	first strand
Strand 2	A	185	193	anti-parallel
Strand 3	A	212	215	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	548	first strand
Strand 2	A	586	590	parallel
Strand 3	A	636	639	parallel
Strand 4	A	519	522	parallel
Strand 5	A	654	657	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	690	first strand
Strand 2	A	735	736	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	765	770	first strand
Strand 2	A	775	784	anti-parallel
Strand 3	A	840	843	anti-parallel
Strand 4	A	800	803	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	877	879	first strand
Strand 2	A	909	913	parallel
Strand 3	A	932	936	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	882	883	first strand
Strand 2	A	889	890	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	142	first strand
Strand 2	B	206	208	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	169	first strand
Strand 2	B	185	193	anti-parallel
Strand 3	B	212	215	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	548	first strand
Strand 2	B	586	590	parallel
Strand 3	B	634	639	parallel
Strand 4	B	518	522	parallel
Strand 5	B	654	657	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	691	first strand
Strand 2	B	735	737	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	764	769	first strand
Strand 2	B	776	784	anti-parallel
Strand 3	B	840	843	anti-parallel
Strand 4	B	800	803	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	877	879	first strand
Strand 2	B	909	913	parallel
Strand 3	B	932	936	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	142	first strand
Strand 2	C	206	208	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	169	first strand
Strand 2	C	185	192	anti-parallel
Strand 3	C	212	215	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	548	first strand
Strand 2	C	586	590	parallel
Strand 3	C	636	639	parallel
Strand 4	C	519	522	parallel
Strand 5	C	654	657	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	691	first strand
Strand 2	C	735	737	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	764	769	first strand
Strand 2	C	776	784	anti-parallel
Strand 3	C	840	843	anti-parallel
Strand 4	C	800	803	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	877	879	first strand
Strand 2	C	909	913	parallel
Strand 3	C	932	936	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	883	first strand
Strand 2	C	889	890	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	140	142	first strand
Strand 2	D	206	208	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	169	first strand
Strand 2	D	185	193	anti-parallel
Strand 3	D	212	215	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	544	548	first strand
Strand 2	D	586	590	parallel
Strand 3	D	635	639	parallel
Strand 4	D	518	522	parallel
Strand 5	D	654	657	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	765	771	first strand
Strand 2	D	774	784	anti-parallel
Strand 3	D	840	843	anti-parallel
Strand 4	D	800	803	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	877	879	first strand
Strand 2	D	909	913	parallel
Strand 3	D	932	936	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	882	883	first strand
Strand 2	D	889	890	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	142	first strand
Strand 2	E	206	208	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	163	169	first strand
Strand 2	E	185	193	anti-parallel
Strand 3	E	212	215	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	544	548	first strand
Strand 2	E	586	590	parallel
Strand 3	E	636	638	parallel
Strand 4	E	519	521	parallel
Strand 5	E	654	656	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	765	769	first strand
Strand 2	E	776	786	anti-parallel
Strand 3	E	839	843	anti-parallel
Strand 4	E	800	803	parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	878	879	first strand
Strand 2	E	909	913	parallel
Strand 3	E	932	936	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	882	883	first strand
Strand 2	E	889	890	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	140	142	first strand
Strand 2	F	206	208	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	163	169	first strand
Strand 2	F	185	193	anti-parallel
Strand 3	F	212	215	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	544	548	first strand
Strand 2	F	586	590	parallel
Strand 3	F	636	639	parallel
Strand 4	F	519	522	parallel
Strand 5	F	654	657	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	764	769	first strand
Strand 2	F	776	784	anti-parallel
Strand 3	F	840	843	anti-parallel
Strand 4	F	800	803	parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	877	879	first strand
Strand 2	F	909	913	parallel
Strand 3	F	932	936	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	882	883	first strand
Strand 2	F	889	890	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OJL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OJL