Analysis of interatomic Contacts of Structural Units in PDB entry:
8OK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OK7 entry

There are 4 chains in PDB entry 8OK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 43ILE 403
B
 THR 43ILE 403
C
 THR 43ILE 403
D
 THR 43THR 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 8OK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 91Right-handed alpha
Helix 2
AA2
A
94 148Right-handed alpha
Helix 3
AA3
A
186 190Right-handed 310
Helix 4
AA4
A
198 202Right-handed 310
Helix 5
AA5
A
255 259Right-handed 310
Helix 6
AA6
A
278 297Right-handed alpha
Helix 7
AA7
A
307 312Right-handed alpha
Helix 8
AA8
A
314 326Right-handed alpha
Helix 9
AA9
A
338 351Right-handed alpha
Helix 10
AB1
A
352 355Right-handed 310
Helix 11
AB2
A
356 361Right-handed alpha
Helix 12
AB3
A
361 366Right-handed alpha
Helix 13
AB4
A
388 403Right-handed alpha
Helix 14
AB5
B
50 91Right-handed alpha
Helix 15
AB6
B
94 128Right-handed alpha
Helix 16
AB7
B
129 148Right-handed alpha
Helix 17
AB8
B
186 190Right-handed 310
Helix 18
AB9
B
198 202Right-handed 310
Helix 19
AC1
B
255 259Right-handed 310
Helix 20
AC2
B
278 297Right-handed alpha
Helix 21
AC3
B
307 313Right-handed alpha
Helix 22
AC4
B
314 326Right-handed alpha
Helix 23
AC5
B
338 351Right-handed alpha
Helix 24
AC6
B
352 355Right-handed 310
Helix 25
AC7
B
356 361Right-handed alpha
Helix 26
AC8
B
361 366Right-handed alpha
Helix 27
AC9
B
388 402Right-handed alpha
Helix 28
AD1
C
50 92Right-handed alpha
Helix 29
AD2
C
94 148Right-handed alpha
Helix 30
AD3
C
186 190Right-handed 310
Helix 31
AD4
C
198 202Right-handed 310
Helix 32
AD5
C
255 259Right-handed 310
Helix 33
AD6
C
278 297Right-handed alpha
Helix 34
AD7
C
307 313Right-handed alpha
Helix 35
AD8
C
314 326Right-handed alpha
Helix 36
AD9
C
338 351Right-handed alpha
Helix 37
AE1
C
352 355Right-handed 310
Helix 38
AE2
C
356 361Right-handed alpha
Helix 39
AE3
C
361 366Right-handed alpha
Helix 40
AE4
C
388 402Right-handed alpha
Helix 41
AE5
D
50 91Right-handed alpha
Helix 42
AE6
D
94 149Right-handed alpha
Helix 43
AE7
D
186 190Right-handed 310
Helix 44
AE8
D
198 202Right-handed 310
Helix 45
AE9
D
255 259Right-handed 310
Helix 46
AF1
D
278 297Right-handed alpha
Helix 47
AF2
D
307 313Right-handed alpha
Helix 48
AF3
D
314 326Right-handed alpha
Helix 49
AF4
D
338 351Right-handed alpha
Helix 50
AF5
D
352 355Right-handed 310
Helix 51
AF6
D
356 361Right-handed alpha
Helix 52
AF7
D
361 368Right-handed alpha
Helix 53
AF8
D
388 403Right-handed alpha
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There are 8 sheets in PDB entry 8OK7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 172first strand
Strand 2
A
153 156anti-parallel
Strand 3
A
238 246anti-parallel
Strand 4
A
211 219anti-parallel
Strand 5
A
269 274anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 374first strand
Strand 2
A
377 380anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 172first strand
Strand 2
B
153 156anti-parallel
Strand 3
B
238 246anti-parallel
Strand 4
B
211 219anti-parallel
Strand 5
B
269 274anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 374first strand
Strand 2
B
377 380anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 172first strand
Strand 2
C
153 156anti-parallel
Strand 3
C
238 246anti-parallel
Strand 4
C
211 219anti-parallel
Strand 5
C
269 274anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 374first strand
Strand 2
C
377 380anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
169 172first strand
Strand 2
D
153 156anti-parallel
Strand 3
D
238 246anti-parallel
Strand 4
D
211 219anti-parallel
Strand 5
D
269 274anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
371 374first strand
Strand 2
D
377 380anti-parallel
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