Analysis of interatomic Contacts of Structural Units in PDB entry:
8OK8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OK8 entry

There are 6 chains in PDB entry 8OK8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 27THR 356
C
 TYR 22PRO 358
E
 ALA 21THR 356
G
 TYR 22THR 356
I
 ALA 21PRO 358
K
 ALA 21THR 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 8OK8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 39Right-handed alpha
Helix 2
AA2
A
44 49Right-handed alpha
Helix 3
AA3
A
57 67Right-handed alpha
Helix 4
AA4
A
112 159Right-handed alpha
Helix 5
AA5
A
223 237Right-handed alpha
Helix 6
AA6
A
248 263Right-handed alpha
Helix 7
AA7
A
299 304Right-handed alpha
Helix 8
AA8
A
311 353Right-handed alpha
Helix 9
AA9
A
354 356Right-handed 310
Helix 10
AB1
C
24 40Right-handed alpha
Helix 11
AB2
C
44 49Right-handed alpha
Helix 12
AB3
C
57 67Right-handed alpha
Helix 13
AB4
C
83 87Right-handed 310
Helix 14
AB5
C
89 94Right-handed alpha
Helix 15
AB6
C
112 159Right-handed alpha
Helix 16
AB7
C
174 179Right-handed alpha
Helix 17
AB8
C
190 199Right-handed alpha
Helix 18
AB9
C
223 230Right-handed alpha
Helix 19
AC1
C
230 235Right-handed alpha
Helix 20
AC2
C
235 242Right-handed alpha
Helix 21
AC3
C
248 263Right-handed alpha
Helix 22
AC4
C
307 310Right-handed 310
Helix 23
AC5
C
311 353Right-handed alpha
Helix 24
AC6
E
24 39Right-handed alpha
Helix 25
AC7
E
57 67Right-handed alpha
Helix 26
AC8
E
87 94Right-handed alpha
Helix 27
AC9
E
113 118Right-handed alpha
Helix 28
AD1
E
118 160Right-handed alpha
Helix 29
AD2
E
174 179Right-handed alpha
Helix 30
AD3
E
190 199Right-handed alpha
Helix 31
AD4
E
223 230Right-handed alpha
Helix 32
AD5
E
237 242Right-handed alpha
Helix 33
AD6
E
248 263Right-handed alpha
Helix 34
AD7
E
274 278Right-handed 310
Helix 35
AD8
E
307 310Right-handed 310
Helix 36
AD9
E
311 353Right-handed alpha
Helix 37
AE1
G
24 38Right-handed alpha
Helix 38
AE2
G
57 65Right-handed alpha
Helix 39
AE3
G
69 73Right-handed 310
Helix 40
AE4
G
88 96Right-handed alpha
Helix 41
AE5
G
113 159Right-handed alpha
Helix 42
AE6
G
190 200Right-handed alpha
Helix 43
AE7
G
223 230Right-handed alpha
Helix 44
AE8
G
230 235Right-handed alpha
Helix 45
AE9
G
237 241Right-handed 310
Helix 46
AF1
G
248 263Right-handed alpha
Helix 47
AF2
G
307 310Right-handed 310
Helix 48
AF3
G
311 353Right-handed alpha
Helix 49
AF4
I
24 40Right-handed alpha
Helix 50
AF5
I
57 67Right-handed alpha
Helix 51
AF6
I
112 159Right-handed alpha
Helix 52
AF7
I
174 179Right-handed alpha
Helix 53
AF8
I
190 199Right-handed alpha
Helix 54
AF9
I
223 232Right-handed alpha
Helix 55
AG1
I
235 241Right-handed alpha
Helix 56
AG2
I
248 260Right-handed alpha
Helix 57
AG3
I
274 276Right-handed 310
Helix 58
AG4
I
307 310Right-handed 310
Helix 59
AG5
I
311 353Right-handed alpha
Helix 60
AG6
I
354 356Right-handed 310
Helix 61
AG7
K
28 40Right-handed alpha
Helix 62
AG8
K
43 49Right-handed alpha
Helix 63
AG9
K
57 66Right-handed alpha
Helix 64
AH1
K
70 74Right-handed 310
Helix 65
AH2
K
89 95Right-handed alpha
Helix 66
AH3
K
112 159Right-handed alpha
Helix 67
AH4
K
168 172Right-handed 310
Helix 68
AH5
K
190 199Right-handed alpha
Helix 69
AH6
K
223 225Right-handed 310
Helix 70
AH7
K
226 234Right-handed alpha
Helix 71
AH8
K
237 241Right-handed 310
Helix 72
AH9
K
248 262Right-handed alpha
Helix 73
AI1
K
307 310Right-handed 310
Helix 74
AI2
K
311 350Right-handed alpha
Helix 75
AI3
K
351 356Right-handed 310
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There are 2 sheets in PDB entry 8OK8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
278 279first strand
Strand 2
G
297 298anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
278 279first strand
Strand 2
I
297 298anti-parallel
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