Analysis of interatomic Contacts of Structural Units in PDB entry:
8ON4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ON4 entry

There is 1 chain in PDB entry 8ON4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 948TRP 1151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There is 1 helix in PDB entry 8ON4. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1033 1040Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 8ON4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
949 955first strand
Strand 2
A
966 972anti-parallel
Strand 3
A
981 986anti-parallel
Strand 4
A
992 994anti-parallel
Strand 5
A
1003 1005parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1025 1029first strand
Strand 2
A
1018 1022anti-parallel
Strand 3
A
1053 1056parallel
Strand 4
A
1070 1073anti-parallel
Strand 5
A
1093 1107anti-parallel
Strand 6
A
1080 1088anti-parallel
Strand 7
A
1044 1049anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1025 1029first strand
Strand 2
A
1018 1022anti-parallel
Strand 3
A
1053 1056parallel
Strand 4
A
1070 1073anti-parallel
Strand 5
A
1093 1107anti-parallel
Strand 6
A
1113 1128anti-parallel
Strand 7
A
1133 1143anti-parallel
Strand 8
A
1146 1150anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il