Analysis of interatomic Contacts of Structural Units in PDB entry:
8ON8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ON8 entry

There are 3 chains in PDB entry 8ON8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	LEU 529
B	ALA 2	LEU 529
C	ALA 2	LEU 529

There are 66 helices in PDB entry 8ON8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	14	Right-handed alpha
Helix 2	AA2	A	18	24	Right-handed alpha
Helix 3	AA3	A	27	58	Right-handed alpha
Helix 4	AA4	A	86	100	Right-handed alpha
Helix 5	AA5	A	102	107	Right-handed 310
Helix 6	AA6	A	112	133	Right-handed alpha
Helix 7	AA7	A	136	144	Right-handed alpha
Helix 8	AA8	A	145	153	Right-handed alpha
Helix 9	AA9	A	154	162	Right-handed alpha
Helix 10	AB1	A	314	332	Right-handed alpha
Helix 11	AB2	A	341	345	Right-handed 310
Helix 12	AB3	A	357	362	Right-handed 310
Helix 13	AB4	A	365	392	Right-handed alpha
Helix 14	AB5	A	392	399	Right-handed alpha
Helix 15	AB6	A	422	425	Right-handed 310
Helix 16	AB7	A	426	435	Right-handed alpha
Helix 17	AB8	A	439	444	Right-handed 310
Helix 18	AB9	A	445	447	Right-handed 310
Helix 19	AC1	A	448	459	Right-handed alpha
Helix 20	AC2	A	463	468	Right-handed alpha
Helix 21	AC3	A	493	508	Right-handed alpha
Helix 22	AC4	A	514	528	Right-handed alpha
Helix 23	AC5	B	3	14	Right-handed alpha
Helix 24	AC6	B	18	24	Right-handed alpha
Helix 25	AC7	B	27	58	Right-handed alpha
Helix 26	AC8	B	86	100	Right-handed alpha
Helix 27	AC9	B	102	107	Right-handed 310
Helix 28	AD1	B	112	133	Right-handed alpha
Helix 29	AD2	B	136	144	Right-handed alpha
Helix 30	AD3	B	145	153	Right-handed alpha
Helix 31	AD4	B	154	162	Right-handed alpha
Helix 32	AD5	B	314	332	Right-handed alpha
Helix 33	AD6	B	341	345	Right-handed 310
Helix 34	AD7	B	357	362	Right-handed 310
Helix 35	AD8	B	365	392	Right-handed alpha
Helix 36	AD9	B	392	399	Right-handed alpha
Helix 37	AE1	B	422	425	Right-handed 310
Helix 38	AE2	B	426	435	Right-handed alpha
Helix 39	AE3	B	439	444	Right-handed 310
Helix 40	AE4	B	445	447	Right-handed 310
Helix 41	AE5	B	448	459	Right-handed alpha
Helix 42	AE6	B	463	468	Right-handed alpha
Helix 43	AE7	B	493	508	Right-handed alpha
Helix 44	AE8	B	514	528	Right-handed alpha
Helix 45	AE9	C	3	14	Right-handed alpha
Helix 46	AF1	C	18	24	Right-handed alpha
Helix 47	AF2	C	27	58	Right-handed alpha
Helix 48	AF3	C	86	100	Right-handed alpha
Helix 49	AF4	C	102	107	Right-handed 310
Helix 50	AF5	C	112	133	Right-handed alpha
Helix 51	AF6	C	136	144	Right-handed alpha
Helix 52	AF7	C	145	153	Right-handed alpha
Helix 53	AF8	C	154	162	Right-handed alpha
Helix 54	AF9	C	314	332	Right-handed alpha
Helix 55	AG1	C	341	345	Right-handed 310
Helix 56	AG2	C	357	362	Right-handed 310
Helix 57	AG3	C	365	392	Right-handed alpha
Helix 58	AG4	C	392	399	Right-handed alpha
Helix 59	AG5	C	422	425	Right-handed 310
Helix 60	AG6	C	426	435	Right-handed alpha
Helix 61	AG7	C	439	444	Right-handed 310
Helix 62	AG8	C	445	447	Right-handed 310
Helix 63	AG9	C	448	459	Right-handed alpha
Helix 64	AH1	C	463	468	Right-handed alpha
Helix 65	AH2	C	493	508	Right-handed alpha
Helix 66	AH3	C	514	528	Right-handed alpha

There are 9 sheets in PDB entry 8ON8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	68	first strand
Strand 2	A	483	490	anti-parallel
Strand 3	A	279	291	parallel
Strand 4	A	471	478	parallel
Strand 5	A	219	224	anti-parallel
Strand 6	A	169	174	anti-parallel
Strand 7	A	177	178	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	68	first strand
Strand 2	A	483	490	anti-parallel
Strand 3	A	279	291	parallel
Strand 4	A	406	418	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	190	first strand
Strand 2	A	194	199	anti-parallel
Strand 3	A	76	81	anti-parallel
Strand 4	A	255	260	anti-parallel
Strand 5	A	273	275	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	68	first strand
Strand 2	B	483	490	anti-parallel
Strand 3	B	279	291	parallel
Strand 4	B	471	478	parallel
Strand 5	B	219	224	anti-parallel
Strand 6	B	169	174	anti-parallel
Strand 7	B	177	178	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	68	first strand
Strand 2	B	483	490	anti-parallel
Strand 3	B	279	291	parallel
Strand 4	B	406	418	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	190	first strand
Strand 2	B	194	199	anti-parallel
Strand 3	B	76	81	anti-parallel
Strand 4	B	255	260	anti-parallel
Strand 5	B	273	275	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	68	first strand
Strand 2	C	483	490	anti-parallel
Strand 3	C	279	291	parallel
Strand 4	C	471	478	parallel
Strand 5	C	219	224	anti-parallel
Strand 6	C	169	174	anti-parallel
Strand 7	C	177	178	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	68	first strand
Strand 2	C	483	490	anti-parallel
Strand 3	C	279	291	parallel
Strand 4	C	406	418	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	185	190	first strand
Strand 2	C	194	199	anti-parallel
Strand 3	C	76	81	anti-parallel
Strand 4	C	255	260	anti-parallel
Strand 5	C	273	275	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ON8

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ON8