Analysis of interatomic Contacts of Structural Units in PDB entry:
8ON9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ON9 entry

There are 6 chains in PDB entry 8ON9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	PHE 530
D	SER 608	ILE 612
E	SER 608	ILE 612
F	SER 608	ILE 612
B	ALA 2	PHE 530
C	ALA 2	PHE 530

There are 63 helices in PDB entry 8ON9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	13	Right-handed alpha
Helix 2	AA2	A	18	25	Right-handed alpha
Helix 3	AA3	A	27	57	Right-handed alpha
Helix 4	AA4	A	86	100	Right-handed alpha
Helix 5	AA5	A	112	124	Right-handed alpha
Helix 6	AA6	A	125	130	Right-handed alpha
Helix 7	AA7	A	136	144	Right-handed alpha
Helix 8	AA8	A	145	151	Right-handed alpha
Helix 9	AA9	A	154	159	Right-handed alpha
Helix 10	AB1	A	180	184	Right-handed alpha
Helix 11	AB2	A	314	332	Right-handed alpha
Helix 12	AB3	A	357	362	Right-handed 310
Helix 13	AB4	A	365	390	Right-handed alpha
Helix 14	AB5	A	392	398	Right-handed alpha
Helix 15	AB6	A	423	435	Right-handed alpha
Helix 16	AB7	A	439	444	Right-handed 310
Helix 17	AB8	A	445	447	Right-handed 310
Helix 18	AB9	A	448	459	Right-handed alpha
Helix 19	AC1	A	463	468	Right-handed alpha
Helix 20	AC2	A	493	509	Right-handed alpha
Helix 21	AC3	A	514	530	Right-handed alpha
Helix 22	AC4	B	3	13	Right-handed alpha
Helix 23	AC5	B	18	25	Right-handed alpha
Helix 24	AC6	B	27	57	Right-handed alpha
Helix 25	AC7	B	86	100	Right-handed alpha
Helix 26	AC8	B	112	124	Right-handed alpha
Helix 27	AC9	B	125	130	Right-handed alpha
Helix 28	AD1	B	136	144	Right-handed alpha
Helix 29	AD2	B	145	151	Right-handed alpha
Helix 30	AD3	B	154	159	Right-handed alpha
Helix 31	AD4	B	180	184	Right-handed alpha
Helix 32	AD5	B	314	332	Right-handed alpha
Helix 33	AD6	B	357	362	Right-handed 310
Helix 34	AD7	B	365	390	Right-handed alpha
Helix 35	AD8	B	392	398	Right-handed alpha
Helix 36	AD9	B	423	435	Right-handed alpha
Helix 37	AE1	B	439	444	Right-handed 310
Helix 38	AE2	B	445	447	Right-handed 310
Helix 39	AE3	B	448	459	Right-handed alpha
Helix 40	AE4	B	463	468	Right-handed alpha
Helix 41	AE5	B	493	509	Right-handed alpha
Helix 42	AE6	B	514	530	Right-handed alpha
Helix 43	AE7	C	3	13	Right-handed alpha
Helix 44	AE8	C	18	25	Right-handed alpha
Helix 45	AE9	C	27	57	Right-handed alpha
Helix 46	AF1	C	86	100	Right-handed alpha
Helix 47	AF2	C	112	124	Right-handed alpha
Helix 48	AF3	C	125	130	Right-handed alpha
Helix 49	AF4	C	136	144	Right-handed alpha
Helix 50	AF5	C	145	151	Right-handed alpha
Helix 51	AF6	C	154	159	Right-handed alpha
Helix 52	AF7	C	180	184	Right-handed alpha
Helix 53	AF8	C	314	332	Right-handed alpha
Helix 54	AF9	C	357	362	Right-handed 310
Helix 55	AG1	C	365	390	Right-handed alpha
Helix 56	AG2	C	392	398	Right-handed alpha
Helix 57	AG3	C	423	435	Right-handed alpha
Helix 58	AG4	C	439	444	Right-handed 310
Helix 59	AG5	C	445	447	Right-handed 310
Helix 60	AG6	C	448	459	Right-handed alpha
Helix 61	AG7	C	463	468	Right-handed alpha
Helix 62	AG8	C	493	509	Right-handed alpha
Helix 63	AG9	C	514	530	Right-handed alpha

There are 9 sheets in PDB entry 8ON9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	68	first strand
Strand 2	A	483	490	anti-parallel
Strand 3	A	279	291	parallel
Strand 4	A	471	478	parallel
Strand 5	A	218	224	anti-parallel
Strand 6	A	169	174	anti-parallel
Strand 7	A	177	178	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	68	first strand
Strand 2	A	483	490	anti-parallel
Strand 3	A	279	291	parallel
Strand 4	A	406	418	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	189	first strand
Strand 2	A	195	199	anti-parallel
Strand 3	A	76	81	anti-parallel
Strand 4	A	255	260	anti-parallel
Strand 5	A	273	275	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	68	first strand
Strand 2	B	483	490	anti-parallel
Strand 3	B	279	291	parallel
Strand 4	B	471	478	parallel
Strand 5	B	218	224	anti-parallel
Strand 6	B	169	174	anti-parallel
Strand 7	B	177	178	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	68	first strand
Strand 2	B	483	490	anti-parallel
Strand 3	B	279	291	parallel
Strand 4	B	406	418	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	189	first strand
Strand 2	B	195	199	anti-parallel
Strand 3	B	76	81	anti-parallel
Strand 4	B	255	260	anti-parallel
Strand 5	B	273	275	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	68	first strand
Strand 2	C	483	490	anti-parallel
Strand 3	C	279	291	parallel
Strand 4	C	471	478	parallel
Strand 5	C	218	224	anti-parallel
Strand 6	C	169	174	anti-parallel
Strand 7	C	177	178	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	68	first strand
Strand 2	C	483	490	anti-parallel
Strand 3	C	279	291	parallel
Strand 4	C	406	418	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	185	189	first strand
Strand 2	C	195	199	anti-parallel
Strand 3	C	76	81	anti-parallel
Strand 4	C	255	260	anti-parallel
Strand 5	C	273	275	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ON9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ON9