Analysis of interatomic Contacts of Structural Units in PDB entry:
8ONX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ONX entry

There is 1 chain in PDB entry 8ONX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 74TYR 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8ONX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 89Right-handed alpha
Helix 2
AA2
A
103 111Right-handed 310
Helix 3
AA3
A
112 122Right-handed alpha
Helix 4
AA4
A
122 147Right-handed alpha
Helix 5
AA5
A
152 169Right-handed alpha
Helix 6
AA6
A
236 238Right-handed 310
Helix 7
AA7
A
239 257Right-handed alpha
Helix 8
AA8
A
262 276Right-handed alpha
Helix 9
AA9
A
362 376Right-handed alpha
Helix 10
AB1
A
383 388Right-handed alpha
Helix 11
AB2
A
394 404Right-handed alpha
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There are 7 sheets in PDB entry 8ONX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
434 437anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
326 334anti-parallel
Strand 5
A
289 290anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
434 437anti-parallel
Strand 3
A
421 430anti-parallel
Strand 4
A
326 334anti-parallel
Strand 5
A
295 298anti-parallel
Strand 6
A
309 311anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
213 222anti-parallel
Strand 3
A
188 191anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
213 222anti-parallel
Strand 3
A
225 234anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
413 414anti-parallel
Strand 3
A
341 342anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
284 287anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 382first strand
Strand 2
A
348 351anti-parallel
Strand 3
A
407 410anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il