Analysis of interatomic Contacts of Structural Units in PDB entry:
8OQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OQJ entry

There are 2 chains in PDB entry 8OQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 321ALA 374
B
 GLU 321PRO 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8OQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
322 328Right-handed alpha
Helix 2
AA2
A
329 340Right-handed alpha
Helix 3
AA3
A
342 346Right-handed 310
Helix 4
AA4
A
350 354Right-handed 310
Helix 5
AA5
A
356 373Right-handed alpha
Helix 6
AA6
B
322 328Right-handed alpha
Helix 7
AA7
B
329 340Right-handed alpha
Helix 8
AA8
B
342 346Right-handed 310
Helix 9
AA9
B
350 354Right-handed 310
Helix 10
AB1
B
356 374Right-handed alpha
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There are no sheets in PDB entry 8OQJ
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