Analysis of interatomic Contacts of Structural Units in PDB entry:
8OR0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OR0 entry

There are 7 chains in PDB entry 8OR0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 17ALA 776
B
 LYS 19TYR 106
C
 ALA 4ALA 1210
D
 PRO 2CYS 166
E
 VAL 95GLN 419
G
 GLN 5LEU 73
H
 HIS 161ALA 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are121 helices in PDB entry 8OR0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 33Right-handed alpha
Helix 2
AA2
A
39 52Right-handed alpha
Helix 3
AA3
A
88 106Right-handed alpha
Helix 4
AA4
A
114 137Right-handed alpha
Helix 5
AA5
A
158 171Right-handed alpha
Helix 6
AA6
A
174 192Right-handed alpha
Helix 7
AA7
A
198 211Right-handed alpha
Helix 8
AA8
A
226 231Right-handed alpha
Helix 9
AA9
A
231 255Right-handed alpha
Helix 10
AB1
A
256 278Right-handed alpha
Helix 11
AB2
A
283 298Right-handed alpha
Helix 12
AB3
A
299 313Right-handed alpha
Helix 13
AB4
A
315 327Right-handed alpha
Helix 14
AB5
A
333 355Right-handed alpha
Helix 15
AB6
A
362 384Right-handed alpha
Helix 16
AB7
A
388 405Right-handed alpha
Helix 17
AB8
A
406 413Right-handed alpha
Helix 18
AB9
A
417 431Right-handed alpha
Helix 19
AC1
A
442 454Right-handed alpha
Helix 20
AC2
A
458 476Right-handed alpha
Helix 21
AC3
A
481 496Right-handed alpha
Helix 22
AC4
A
497 525Right-handed alpha
Helix 23
AC5
A
559 574Right-handed alpha
Helix 24
AC6
A
604 613Right-handed alpha
Helix 25
AC7
A
621 630Right-handed alpha
Helix 26
AC8
A
632 645Right-handed alpha
Helix 27
AC9
A
690 719Right-handed alpha
Helix 28
AD1
A
726 738Right-handed alpha
Helix 29
AD2
A
745 759Right-handed alpha
Helix 30
AD3
B
36 41Right-handed alpha
Helix 31
AD4
B
53 59Right-handed alpha
Helix 32
AD5
B
63 68Right-handed alpha
Helix 33
AD6
B
80 88Right-handed alpha
Helix 34
AD7
C
5 16Right-handed alpha
Helix 35
AD8
C
20 36Right-handed alpha
Helix 36
AD9
C
44 58Right-handed alpha
Helix 37
AE1
C
61 79Right-handed alpha
Helix 38
AE2
C
83 96Right-handed alpha
Helix 39
AE3
C
99 117Right-handed alpha
Helix 40
AE4
C
128 142Right-handed alpha
Helix 41
AE5
C
148 165Right-handed alpha
Helix 42
AE6
C
172 181Right-handed alpha
Helix 43
AE7
C
182 186Right-handed 310
Helix 44
AE8
C
188 206Right-handed alpha
Helix 45
AE9
C
213 227Right-handed alpha
Helix 46
AF1
C
231 245Right-handed alpha
Helix 47
AF2
C
252 265Right-handed alpha
Helix 48
AF3
C
270 285Right-handed alpha
Helix 49
AF4
C
290 302Right-handed alpha
Helix 50
AF5
C
345 364Right-handed alpha
Helix 51
AF6
C
367 374Right-handed alpha
Helix 52
AF7
C
375 383Right-handed alpha
Helix 53
AF8
C
387 405Right-handed alpha
Helix 54
AF9
C
423 443Right-handed alpha
Helix 55
AG1
C
447 465Right-handed alpha
Helix 56
AG2
C
472 486Right-handed alpha
Helix 57
AG3
C
490 508Right-handed alpha
Helix 58
AG4
C
509 513Right-handed 310
Helix 59
AG5
C
516 529Right-handed alpha
Helix 60
AG6
C
532 551Right-handed alpha
Helix 61
AG7
C
561 575Right-handed alpha
Helix 62
AG8
C
582 601Right-handed alpha
Helix 63
AG9
C
607 612Right-handed alpha
Helix 64
AH1
C
612 621Right-handed alpha
Helix 65
AH2
C
625 637Right-handed alpha
Helix 66
AH3
C
644 658Right-handed alpha
Helix 67
AH4
C
663 681Right-handed alpha
Helix 68
AH5
C
686 696Right-handed alpha
Helix 69
AH6
C
706 723Right-handed alpha
Helix 70
AH7
C
733 743Right-handed alpha
Helix 71
AH8
C
749 765Right-handed alpha
Helix 72
AH9
C
771 785Right-handed alpha
Helix 73
AI1
C
792 809Right-handed alpha
Helix 74
AI2
C
814 826Right-handed alpha
Helix 75
AI3
C
831 846Right-handed alpha
Helix 76
AI4
C
857 866Right-handed alpha
Helix 77
AI5
C
870 887Right-handed alpha
Helix 78
AI6
C
887 902Right-handed alpha
Helix 79
AI7
C
906 920Right-handed alpha
Helix 80
AI8
C
921 926Right-handed alpha
Helix 81
AI9
C
928 937Right-handed alpha
Helix 82
AJ1
C
938 941Right-handed 310
Helix 83
AJ2
C
944 959Right-handed alpha
Helix 84
AJ3
C
962 971Right-handed alpha
Helix 85
AJ4
C
972 977Right-handed alpha
Helix 86
AJ5
C
978 990Right-handed alpha
Helix 87
AJ6
C
1000 1015Right-handed alpha
Helix 88
AJ7
C
1019 1037Right-handed alpha
Helix 89
AJ8
C
1038 1043Right-handed 310
Helix 90
AJ9
C
1044 1055Right-handed alpha
Helix 91
AK1
C
1078 1096Right-handed alpha
Helix 92
AK2
C
1101 1112Right-handed alpha
Helix 93
AK3
C
1116 1133Right-handed alpha
Helix 94
AK4
C
1134 1138Right-handed 310
Helix 95
AK5
C
1141 1154Right-handed alpha
Helix 96
AK6
C
1163 1185Right-handed alpha
Helix 97
AK7
C
1204 1210Right-handed alpha
Helix 98
AK8
D
27 32Right-handed alpha
Helix 99
AK9
D
51 65Right-handed alpha
Helix 100
AL1
D
93 99Right-handed alpha
Helix 101
AL2
D
102 116Right-handed alpha
Helix 102
AL3
D
119 133Right-handed alpha
Helix 103
AL4
D
137 146Right-handed alpha
Helix 104
AL5
D
155 162Right-handed alpha
Helix 105
AL6
E
101 110Right-handed alpha
Helix 106
AL7
E
113 120Right-handed alpha
Helix 107
AL8
E
124 132Right-handed alpha
Helix 108
AL9
E
148 157Right-handed alpha
Helix 109
AM1
E
195 199Right-handed 310
Helix 110
AM2
E
219 227Right-handed alpha
Helix 111
AM3
E
245 255Right-handed alpha
Helix 112
AM4
E
271 274Right-handed 310
Helix 113
AM5
E
275 280Right-handed alpha
Helix 114
AM6
E
298 309Right-handed alpha
Helix 115
AM7
E
326 331Right-handed alpha
Helix 116
AM8
E
352 356Right-handed 310
Helix 117
AM9
E
377 383Right-handed 310
Helix 118
AN1
G
27 31Right-handed 310
Helix 119
AN2
H
170 175Right-handed alpha
Helix 120
AN3
H
182 187Right-handed alpha
Helix 121
AN4
H
209 220Right-handed alpha
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There are 8 sheets in PDB entry 8OR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 541first strand
Strand 2
B
29 35parallel
Strand 3
A
577 579anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 591first strand
Strand 2
B
23 24anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
762 764first strand
Strand 2
A
772 774anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
13 17anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
185 187first strand
Strand 2
E
162 164parallel
Strand 3
E
139 141parallel
Strand 4
E
416 417parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
169 170first strand
Strand 2
E
192 193parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
213 214first strand
Strand 2
E
237 238parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
261 264first strand
Strand 2
E
287 291parallel
Strand 3
E
314 315parallel
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