Analysis of interatomic Contacts of Structural Units in PDB entry:
8OSG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OSG entry

There are 6 chains in PDB entry 8OSG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 14	VAL 353
B	VAL 14	VAL 353
C	VAL 14	VAL 353
D	VAL 14	VAL 353
E	VAL 14	VAL 353
F	VAL 14	VAL 353

There are 93 helices in PDB entry 8OSG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	36	Right-handed alpha
Helix 2	AA2	A	52	63	Right-handed alpha
Helix 3	AA3	A	116	121	Right-handed alpha
Helix 4	AA4	A	154	158	Right-handed 310
Helix 5	AA5	A	161	170	Right-handed alpha
Helix 6	AA6	A	206	211	Right-handed 310
Helix 7	AA7	A	222	239	Right-handed alpha
Helix 8	AA8	A	247	265	Right-handed alpha
Helix 9	AA9	A	266	268	Right-handed 310
Helix 10	AB1	A	271	285	Right-handed alpha
Helix 11	AB2	A	290	294	Right-handed 310
Helix 12	AB3	A	295	307	Right-handed alpha
Helix 13	AB4	A	313	319	Right-handed alpha
Helix 14	AB5	A	321	326	Right-handed alpha
Helix 15	AB6	A	327	329	Right-handed 310
Helix 16	AB7	A	338	350	Right-handed alpha
Helix 17	AB8	B	17	21	Right-handed 310
Helix 18	AB9	B	26	37	Right-handed alpha
Helix 19	AC1	B	52	60	Right-handed alpha
Helix 20	AC2	B	88	93	Right-handed alpha
Helix 21	AC3	B	116	121	Right-handed alpha
Helix 22	AC4	B	140	145	Right-handed alpha
Helix 23	AC5	B	165	170	Right-handed alpha
Helix 24	AC6	B	204	209	Right-handed alpha
Helix 25	AC7	B	222	239	Right-handed alpha
Helix 26	AC8	B	243	252	Right-handed alpha
Helix 27	AC9	B	256	265	Right-handed alpha
Helix 28	AD1	B	266	268	Right-handed 310
Helix 29	AD2	B	271	286	Right-handed alpha
Helix 30	AD3	B	290	307	Right-handed alpha
Helix 31	AD4	B	313	326	Right-handed alpha
Helix 32	AD5	B	327	329	Right-handed 310
Helix 33	AD6	B	340	351	Right-handed alpha
Helix 34	AD7	C	24	37	Right-handed alpha
Helix 35	AD8	C	52	60	Right-handed alpha
Helix 36	AD9	C	61	63	Right-handed 310
Helix 37	AE1	C	88	92	Right-handed 310
Helix 38	AE2	C	117	122	Right-handed alpha
Helix 39	AE3	C	140	145	Right-handed alpha
Helix 40	AE4	C	206	211	Right-handed alpha
Helix 41	AE5	C	222	239	Right-handed alpha
Helix 42	AE6	C	248	262	Right-handed alpha
Helix 43	AE7	C	264	268	Right-handed 310
Helix 44	AE8	C	271	286	Right-handed alpha
Helix 45	AE9	C	293	305	Right-handed alpha
Helix 46	AF1	C	338	352	Right-handed alpha
Helix 47	AF2	D	17	21	Right-handed 310
Helix 48	AF3	D	26	37	Right-handed alpha
Helix 49	AF4	D	52	60	Right-handed alpha
Helix 50	AF5	D	88	93	Right-handed alpha
Helix 51	AF6	D	116	121	Right-handed alpha
Helix 52	AF7	D	141	146	Right-handed 310
Helix 53	AF8	D	161	163	Right-handed 310
Helix 54	AF9	D	164	170	Right-handed alpha
Helix 55	AG1	D	206	210	Right-handed 310
Helix 56	AG2	D	222	239	Right-handed alpha
Helix 57	AG3	D	239	245	Right-handed alpha
Helix 58	AG4	D	247	262	Right-handed alpha
Helix 59	AG5	D	264	268	Right-handed 310
Helix 60	AG6	D	271	285	Right-handed alpha
Helix 61	AG7	D	291	308	Right-handed alpha
Helix 62	AG8	D	317	322	Right-handed alpha
Helix 63	AG9	D	340	351	Right-handed alpha
Helix 64	AH1	E	17	21	Right-handed 310
Helix 65	AH2	E	24	37	Right-handed alpha
Helix 66	AH3	E	52	58	Right-handed alpha
Helix 67	AH4	E	59	61	Right-handed 310
Helix 68	AH5	E	81	85	Right-handed 310
Helix 69	AH6	E	86	91	Right-handed alpha
Helix 70	AH7	E	116	121	Right-handed alpha
Helix 71	AH8	E	142	146	Right-handed 310
Helix 72	AH9	E	159	170	Right-handed alpha
Helix 73	AI1	E	206	210	Right-handed 310
Helix 74	AI2	E	222	239	Right-handed alpha
Helix 75	AI3	E	239	247	Right-handed alpha
Helix 76	AI4	E	247	256	Right-handed alpha
Helix 77	AI5	E	260	265	Right-handed alpha
Helix 78	AI6	E	266	268	Right-handed 310
Helix 79	AI7	E	271	285	Right-handed alpha
Helix 80	AI8	E	291	308	Right-handed alpha
Helix 81	AI9	E	313	319	Right-handed alpha
Helix 82	AJ1	E	320	325	Right-handed alpha
Helix 83	AJ2	E	338	352	Right-handed alpha
Helix 84	AJ3	F	25	37	Right-handed alpha
Helix 85	AJ4	F	52	62	Right-handed alpha
Helix 86	AJ5	F	161	170	Right-handed alpha
Helix 87	AJ6	F	204	209	Right-handed alpha
Helix 88	AJ7	F	222	239	Right-handed alpha
Helix 89	AJ8	F	240	263	Right-handed alpha
Helix 90	AJ9	F	271	285	Right-handed alpha
Helix 91	AK1	F	290	308	Right-handed alpha
Helix 92	AK2	F	313	325	Right-handed alpha
Helix 93	AK3	F	338	352	Right-handed alpha

There are 15 sheets in PDB entry 8OSG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	149	151	parallel
Strand 3	A	192	193	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	111	first strand
Strand 2	B	149	152	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	123	first strand
Strand 2	B	138	139	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	177	first strand
Strand 2	B	184	187	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	110	first strand
Strand 2	C	149	152	parallel
Strand 3	C	193	194	parallel
Strand 4	C	43	46	parallel
Strand 5	C	213	216	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	104	105	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	177	first strand
Strand 2	C	184	186	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	111	first strand
Strand 2	D	149	152	parallel
Strand 3	D	193	196	parallel
Strand 4	D	43	47	parallel
Strand 5	D	213	217	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	70	first strand
Strand 2	D	101	105	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	177	first strand
Strand 2	D	184	187	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	47	first strand
Strand 2	E	213	217	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	70	first strand
Strand 2	E	101	105	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	111	first strand
Strand 2	E	149	152	parallel
Strand 3	E	193	194	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	196	first strand
Strand 2	F	42	46	parallel
Strand 3	F	213	216	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	109	110	first strand
Strand 2	F	150	151	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OSG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OSG