Analysis of interatomic Contacts of Structural Units in PDB entry:
8OSH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OSH entry

There are 5 chains in PDB entry 8OSH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 14	VAL 353
B	VAL 14	VAL 353
C	VAL 14	VAL 353
D	VAL 14	VAL 353
E	ALA 20	GLY 352

There are 70 helices in PDB entry 8OSH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	37	Right-handed alpha
Helix 2	AA2	A	52	63	Right-handed alpha
Helix 3	AA3	A	117	121	Right-handed alpha
Helix 4	AA4	A	141	144	Right-handed 310
Helix 5	AA5	A	166	170	Right-handed 310
Helix 6	AA6	A	207	211	Right-handed 310
Helix 7	AA7	A	222	239	Right-handed alpha
Helix 8	AA8	A	242	247	Right-handed alpha
Helix 9	AA9	A	247	264	Right-handed alpha
Helix 10	AB1	A	265	268	Right-handed 310
Helix 11	AB2	A	275	285	Right-handed alpha
Helix 12	AB3	A	291	308	Right-handed alpha
Helix 13	AB4	A	315	326	Right-handed alpha
Helix 14	AB5	A	327	329	Right-handed 310
Helix 15	AB6	A	340	352	Right-handed alpha
Helix 16	AB7	B	24	37	Right-handed alpha
Helix 17	AB8	B	49	62	Right-handed alpha
Helix 18	AB9	B	88	93	Right-handed alpha
Helix 19	AC1	B	116	121	Right-handed alpha
Helix 20	AC2	B	162	170	Right-handed alpha
Helix 21	AC3	B	197	201	Right-handed 310
Helix 22	AC4	B	222	239	Right-handed alpha
Helix 23	AC5	B	242	265	Right-handed alpha
Helix 24	AC6	B	271	282	Right-handed alpha
Helix 25	AC7	B	283	285	Right-handed 310
Helix 26	AC8	B	290	308	Right-handed alpha
Helix 27	AC9	B	313	326	Right-handed alpha
Helix 28	AD1	B	340	348	Right-handed alpha
Helix 29	AD2	C	24	35	Right-handed alpha
Helix 30	AD3	C	52	58	Right-handed alpha
Helix 31	AD4	C	59	61	Right-handed 310
Helix 32	AD5	C	88	93	Right-handed alpha
Helix 33	AD6	C	140	145	Right-handed alpha
Helix 34	AD7	C	164	173	Right-handed alpha
Helix 35	AD8	C	197	201	Right-handed 310
Helix 36	AD9	C	222	239	Right-handed alpha
Helix 37	AE1	C	239	247	Right-handed alpha
Helix 38	AE2	C	247	265	Right-handed alpha
Helix 39	AE3	C	272	283	Right-handed alpha
Helix 40	AE4	C	284	287	Right-handed 310
Helix 41	AE5	C	289	307	Right-handed alpha
Helix 42	AE6	C	315	326	Right-handed alpha
Helix 43	AE7	C	339	352	Right-handed alpha
Helix 44	AE8	D	17	21	Right-handed 310
Helix 45	AE9	D	24	34	Right-handed alpha
Helix 46	AF1	D	49	61	Right-handed alpha
Helix 47	AF2	D	142	146	Right-handed 310
Helix 48	AF3	D	154	158	Right-handed 310
Helix 49	AF4	D	159	170	Right-handed alpha
Helix 50	AF5	D	197	201	Right-handed 310
Helix 51	AF6	D	204	210	Right-handed alpha
Helix 52	AF7	D	223	238	Right-handed alpha
Helix 53	AF8	D	239	253	Right-handed alpha
Helix 54	AF9	D	271	279	Right-handed alpha
Helix 55	AG1	D	291	304	Right-handed alpha
Helix 56	AG2	D	314	322	Right-handed alpha
Helix 57	AG3	D	324	330	Right-handed alpha
Helix 58	AG4	E	24	36	Right-handed alpha
Helix 59	AG5	E	53	63	Right-handed alpha
Helix 60	AG6	E	142	147	Right-handed 310
Helix 61	AG7	E	161	169	Right-handed alpha
Helix 62	AG8	E	205	209	Right-handed alpha
Helix 63	AG9	E	222	238	Right-handed alpha
Helix 64	AH1	E	243	246	Right-handed 310
Helix 65	AH2	E	247	264	Right-handed alpha
Helix 66	AH3	E	265	268	Right-handed 310
Helix 67	AH4	E	271	285	Right-handed alpha
Helix 68	AH5	E	290	303	Right-handed alpha
Helix 69	AH6	E	313	326	Right-handed alpha
Helix 70	AH7	E	340	351	Right-handed alpha

There are 11 sheets in PDB entry 8OSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	151	first strand
Strand 2	A	191	195	parallel
Strand 3	A	43	46	parallel
Strand 4	A	213	216	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	68	first strand
Strand 2	A	103	104	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	138	139	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	196	first strand
Strand 2	B	43	46	parallel
Strand 3	B	213	216	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	150	151	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	123	first strand
Strand 2	B	138	139	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	196	first strand
Strand 2	C	43	46	parallel
Strand 3	C	213	214	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	175	first strand
Strand 2	C	186	187	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	45	first strand
Strand 2	D	214	215	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	151	first strand
Strand 2	D	191	193	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	151	first strand
Strand 2	E	190	193	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OSH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OSH