Analysis of interatomic Contacts of Structural Units in PDB entry:
8OTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OTE entry

There are 8 chains in PDB entry 8OTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 120GLY 254
B
SER 120GLY 254
C
SER 120GLY 254
D
SER 120GLY 254
E
SER 120GLY 254
F
SER 120GLY 254
G
SER 120GLY 254
H
SER 120GLY 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8OTE


There are 23 sheets in PDB entry 8OTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
121 126first strand
Strand 2
A
121 126parallel
Strand 3
C
121 126parallel
Strand 4
G
121 126parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
129 130first strand
Strand 2
A
129 130parallel
Strand 3
C
129 130parallel
Strand 4
G
129 130parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
144 148first strand
Strand 2
A
144 148parallel
Strand 3
C
144 148parallel
Strand 4
G
144 148parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
155 157first strand
Strand 2
A
155 157parallel
Strand 3
C
155 157parallel
Strand 4
G
155 157parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
163 165first strand
Strand 2
A
163 165parallel
Strand 3
C
163 165parallel
Strand 4
G
163 165parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
168 175first strand
Strand 2
A
168 175parallel
Strand 3
C
168 175parallel
Strand 4
G
168 175parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
180 181first strand
Strand 2
A
180 181parallel
Strand 3
C
180 181parallel
Strand 4
G
180 181parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
184 187first strand
Strand 2
A
184 187parallel
Strand 3
C
184 187parallel
Strand 4
G
184 187parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
201 206first strand
Strand 2
A
201 206parallel
Strand 3
C
201 206parallel
Strand 4
G
201 206parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
224 230first strand
Strand 2
A
224 230parallel
Strand 3
C
224 230parallel
Strand 4
G
224 230parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
235 237first strand
Strand 2
A
235 237parallel
Strand 3
C
235 237parallel
Strand 4
G
235 237parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
246 247first strand
Strand 2
A
246 247parallel
Strand 3
C
246 247parallel
Strand 4
G
246 247parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
121 126first strand
Strand 2
B
121 126parallel
Strand 3
D
121 126parallel
Strand 4
H
121 126parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
129 130first strand
Strand 2
B
129 130parallel
Strand 3
D
129 130parallel
Strand 4
H
129 130parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
147 148first strand
Strand 2
B
147 148parallel
Strand 3
D
147 148parallel
Strand 4
H
147 148parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
155 157first strand
Strand 2
B
155 157parallel
Strand 3
D
155 157parallel
Strand 4
H
155 157parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
163 165first strand
Strand 2
B
163 165parallel
Strand 3
D
163 165parallel
Strand 4
H
163 165parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
168 175first strand
Strand 2
B
168 175parallel
Strand 3
D
168 175parallel
Strand 4
H
168 175parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
180 181first strand
Strand 2
B
180 181parallel
Strand 3
D
180 181parallel
Strand 4
H
180 181parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
184 187first strand
Strand 2
B
184 187parallel
Strand 3
D
184 187parallel
Strand 4
H
184 187parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
201 204first strand
Strand 2
B
201 204parallel
Strand 3
D
201 204parallel
Strand 4
H
201 204parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
224 230first strand
Strand 2
B
224 230parallel
Strand 3
D
224 230parallel
Strand 4
H
224 230parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
246 247first strand
Strand 2
B
246 247parallel
Strand 3
D
246 247parallel
Strand 4
H
246 247parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il