Analysis of interatomic Contacts of Structural Units in PDB entry:
8OTQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OTQ entry

There are 2 chains in PDB entry 8OTQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 71ARG 1190
B
 HIS 71ARG 1190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 8OTQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 95Right-handed alpha
Helix 2
AA2
A
101 120Right-handed alpha
Helix 3
AA3
A
120 132Right-handed alpha
Helix 4
AA4
A
134 141Right-handed alpha
Helix 5
AA5
A
141 153Right-handed alpha
Helix 6
AA6
A
155 161Right-handed alpha
Helix 7
AA7
A
162 189Right-handed alpha
Helix 8
AA8
A
194 205Right-handed alpha
Helix 9
AA9
A
210 221Right-handed alpha
Helix 10
AB1
A
223 254Right-handed alpha
Helix 11
AB2
A
260 273Right-handed alpha
Helix 12
AB3
A
273 291Right-handed alpha
Helix 13
AB4
A
296 317Right-handed alpha
Helix 14
AB5
A
323 337Right-handed alpha
Helix 15
AB6
A
338 341Right-handed 310
Helix 16
AB7
A
344 379Right-handed alpha
Helix 17
AB8
A
381 406Right-handed alpha
Helix 18
AB9
A
418 428Right-handed alpha
Helix 19
AC1
A
432 446Right-handed alpha
Helix 20
AC2
A
452 481Right-handed alpha
Helix 21
AC3
A
487 514Right-handed alpha
Helix 22
AC4
A
524 529Right-handed alpha
Helix 23
AC5
A
575 601Right-handed alpha
Helix 24
AC6
A
605 621Right-handed alpha
Helix 25
AC7
A
634 639Right-handed alpha
Helix 26
AC8
A
642 654Right-handed alpha
Helix 27
AC9
A
668 677Right-handed alpha
Helix 28
AD1
A
677 703Right-handed alpha
Helix 29
AD2
A
724 752Right-handed alpha
Helix 30
AD3
A
756 761Right-handed alpha
Helix 31
AD4
A
764 777Right-handed alpha
Helix 32
AD5
A
802 812Right-handed 310
Helix 33
AD6
A
813 858Right-handed alpha
Helix 34
AD7
A
861 889Right-handed alpha
Helix 35
AD8
A
889 919Right-handed alpha
Helix 36
AD9
A
923 943Right-handed alpha
Helix 37
AE1
A
952 960Right-handed alpha
Helix 38
AE2
A
961 964Right-handed 310
Helix 39
AE3
A
966 976Right-handed alpha
Helix 40
AE4
A
1043 1050Right-handed alpha
Helix 41
AE5
A
1069 1080Right-handed alpha
Helix 42
AE6
A
1085 1107Right-handed alpha
Helix 43
AE7
A
1115 1124Right-handed alpha
Helix 44
AE8
B
77 95Right-handed alpha
Helix 45
AE9
B
101 120Right-handed alpha
Helix 46
AF1
B
120 132Right-handed alpha
Helix 47
AF2
B
134 141Right-handed alpha
Helix 48
AF3
B
141 153Right-handed alpha
Helix 49
AF4
B
155 161Right-handed alpha
Helix 50
AF5
B
162 189Right-handed alpha
Helix 51
AF6
B
194 205Right-handed alpha
Helix 52
AF7
B
210 221Right-handed alpha
Helix 53
AF8
B
223 254Right-handed alpha
Helix 54
AF9
B
260 273Right-handed alpha
Helix 55
AG1
B
273 291Right-handed alpha
Helix 56
AG2
B
296 317Right-handed alpha
Helix 57
AG3
B
323 337Right-handed alpha
Helix 58
AG4
B
338 341Right-handed 310
Helix 59
AG5
B
344 379Right-handed alpha
Helix 60
AG6
B
383 406Right-handed alpha
Helix 61
AG7
B
418 428Right-handed alpha
Helix 62
AG8
B
432 446Right-handed alpha
Helix 63
AG9
B
452 481Right-handed alpha
Helix 64
AH1
B
487 514Right-handed alpha
Helix 65
AH2
B
524 529Right-handed alpha
Helix 66
AH3
B
575 601Right-handed alpha
Helix 67
AH4
B
605 621Right-handed alpha
Helix 68
AH5
B
634 639Right-handed alpha
Helix 69
AH6
B
642 654Right-handed alpha
Helix 70
AH7
B
668 677Right-handed alpha
Helix 71
AH8
B
677 703Right-handed alpha
Helix 72
AH9
B
724 752Right-handed alpha
Helix 73
AI1
B
756 761Right-handed alpha
Helix 74
AI2
B
764 777Right-handed alpha
Helix 75
AI3
B
802 812Right-handed 310
Helix 76
AI4
B
813 858Right-handed alpha
Helix 77
AI5
B
861 889Right-handed alpha
Helix 78
AI6
B
889 919Right-handed alpha
Helix 79
AI7
B
923 943Right-handed alpha
Helix 80
AI8
B
952 960Right-handed alpha
Helix 81
AI9
B
961 964Right-handed 310
Helix 82
AJ1
B
966 976Right-handed alpha
Helix 83
AJ2
B
1043 1050Right-handed alpha
Helix 84
AJ3
B
1069 1080Right-handed alpha
Helix 85
AJ4
B
1085 1107Right-handed alpha
Helix 86
AJ5
B
1115 1124Right-handed alpha
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There are 9 sheets in PDB entry 8OTQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
978 982first strand
Strand 2
A
1063 1067anti-parallel
Strand 3
A
1000 1003anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
987 989first strand
Strand 2
A
1055 1059anti-parallel
Strand 3
A
1006 1010anti-parallel
Strand 4
A
1033 1036anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1125 1127first strand
Strand 2
A
1185 1188anti-parallel
Strand 3
A
1145 1149anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1136first strand
Strand 2
A
1174 1175anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1152 1153first strand
Strand 2
A
1160 1161anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
978 982first strand
Strand 2
B
1063 1067anti-parallel
Strand 3
B
1000 1003anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
987 989first strand
Strand 2
B
1055 1059anti-parallel
Strand 3
B
1006 1010anti-parallel
Strand 4
B
1033 1036anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1125 1127first strand
Strand 2
B
1185 1188anti-parallel
Strand 3
B
1145 1149anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1135 1137first strand
Strand 2
B
1173 1175anti-parallel
Strand 3
B
1152 1154anti-parallel
Strand 4
B
1160 1161anti-parallel
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