Analysis of interatomic Contacts of Structural Units in PDB entry:
8OTS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OTS entry

There are 13 chains in PDB entry 8OTS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 40GLU 133
B
 VAL 21GLY 102
C
 GLY 8LEU 116
D
 SER 32ALA 124
E
 HIS 39GLU 133
F
 LEU 22GLY 102
G
 LYS 9PRO 117
H
 ARG 33ALA 124
I
 C 8 T 134
J
 A 14 G 140
K
 ASP 138GLU 210
M
 VAL 354GLU 432
N
 ASP 23ARG 100
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8OTS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 57Right-handed alpha
Helix 2
AA2
A
63 76Right-handed alpha
Helix 3
AA3
A
85 114Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
B
24 29Right-handed 310
Helix 6
AA6
B
30 41Right-handed alpha
Helix 7
AA7
B
49 76Right-handed alpha
Helix 8
AA8
B
82 92Right-handed alpha
Helix 9
AA9
C
16 21Right-handed alpha
Helix 10
AB1
C
26 37Right-handed alpha
Helix 11
AB2
C
46 73Right-handed alpha
Helix 12
AB3
C
79 89Right-handed alpha
Helix 13
AB4
C
90 97Right-handed alpha
Helix 14
AB5
C
112 116Right-handed 310
Helix 15
AB6
D
37 49Right-handed alpha
Helix 16
AB7
D
55 84Right-handed alpha
Helix 17
AB8
D
90 102Right-handed alpha
Helix 18
AB9
D
103 123Right-handed alpha
Helix 19
AC1
E
44 57Right-handed alpha
Helix 20
AC2
E
63 79Right-handed alpha
Helix 21
AC3
E
85 114Right-handed alpha
Helix 22
AC4
E
120 132Right-handed alpha
Helix 23
AC5
F
24 29Right-handed 310
Helix 24
AC6
F
30 41Right-handed alpha
Helix 25
AC7
F
49 76Right-handed alpha
Helix 26
AC8
F
82 92Right-handed alpha
Helix 27
AC9
G
16 21Right-handed alpha
Helix 28
AD1
G
26 36Right-handed alpha
Helix 29
AD2
G
46 73Right-handed alpha
Helix 30
AD3
G
79 89Right-handed alpha
Helix 31
AD4
G
90 97Right-handed alpha
Helix 32
AD5
G
112 116Right-handed 310
Helix 33
AD6
H
37 49Right-handed alpha
Helix 34
AD7
H
55 84Right-handed alpha
Helix 35
AD8
H
90 102Right-handed alpha
Helix 36
AD9
H
103 124Right-handed alpha
Helix 37
AE1
K
139 160Right-handed alpha
Helix 38
AE2
K
163 176Right-handed alpha
Helix 39
AE3
K
180 189Right-handed alpha
Helix 40
AE4
K
193 210Right-handed alpha
Helix 41
AE5
M
355 379Right-handed alpha
Helix 42
AE6
M
380 385Right-handed 310
Helix 43
AE7
M
391 432Right-handed alpha
Helix 44
AE8
N
24 48Right-handed alpha
Helix 45
AE9
N
59 100Right-handed alpha
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There are 10 sheets in PDB entry 8OTS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
B
80 81parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
B
45 46parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 98first strand
Strand 2
G
101 102parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 43first strand
Strand 2
D
88 89parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
D
53 54parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 102first strand
Strand 2
F
97 98parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 84first strand
Strand 2
F
80 81parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
42 43first strand
Strand 2
H
88 89parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
77 78first strand
Strand 2
H
53 54parallel
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