Analysis of interatomic Contacts of Structural Units in PDB entry:
8OTX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OTX entry

There are 2 chains in PDB entry 8OTX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 68ARG 1190
A
 ASP 68ARG 1190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 8OTX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
76 95Right-handed alpha
Helix 2
AA2
B
101 120Right-handed alpha
Helix 3
AA3
B
120 126Right-handed alpha
Helix 4
AA4
B
134 154Right-handed alpha
Helix 5
AA5
B
155 162Right-handed alpha
Helix 6
AA6
B
162 189Right-handed alpha
Helix 7
AA7
B
194 206Right-handed alpha
Helix 8
AA8
B
210 220Right-handed alpha
Helix 9
AA9
B
223 254Right-handed alpha
Helix 10
AB1
B
260 291Right-handed alpha
Helix 11
AB2
B
296 317Right-handed alpha
Helix 12
AB3
B
322 337Right-handed alpha
Helix 13
AB4
B
342 376Right-handed alpha
Helix 14
AB5
B
377 379Right-handed 310
Helix 15
AB6
B
381 413Right-handed alpha
Helix 16
AB7
B
418 428Right-handed alpha
Helix 17
AB8
B
432 446Right-handed alpha
Helix 18
AB9
B
448 481Right-handed alpha
Helix 19
AC1
B
487 515Right-handed alpha
Helix 20
AC2
B
524 529Right-handed alpha
Helix 21
AC3
B
574 600Right-handed alpha
Helix 22
AC4
B
605 621Right-handed alpha
Helix 23
AC5
B
634 639Right-handed alpha
Helix 24
AC6
B
641 654Right-handed alpha
Helix 25
AC7
B
668 677Right-handed alpha
Helix 26
AC8
B
677 704Right-handed alpha
Helix 27
AC9
B
724 750Right-handed alpha
Helix 28
AD1
B
756 761Right-handed alpha
Helix 29
AD2
B
761 783Right-handed alpha
Helix 30
AD3
B
799 806Right-handed 310
Helix 31
AD4
B
807 812Right-handed alpha
Helix 32
AD5
B
813 857Right-handed alpha
Helix 33
AD6
B
863 889Right-handed alpha
Helix 34
AD7
B
889 919Right-handed alpha
Helix 35
AD8
B
923 943Right-handed alpha
Helix 36
AD9
B
952 959Right-handed alpha
Helix 37
AE1
B
966 976Right-handed alpha
Helix 38
AE2
B
1043 1050Right-handed alpha
Helix 39
AE3
B
1069 1080Right-handed alpha
Helix 40
AE4
B
1085 1107Right-handed alpha
Helix 41
AE5
B
1115 1123Right-handed alpha
Helix 42
AE6
A
76 95Right-handed alpha
Helix 43
AE7
A
101 120Right-handed alpha
Helix 44
AE8
A
120 126Right-handed alpha
Helix 45
AE9
A
134 154Right-handed alpha
Helix 46
AF1
A
155 162Right-handed alpha
Helix 47
AF2
A
162 189Right-handed alpha
Helix 48
AF3
A
194 206Right-handed alpha
Helix 49
AF4
A
210 220Right-handed alpha
Helix 50
AF5
A
223 254Right-handed alpha
Helix 51
AF6
A
260 291Right-handed alpha
Helix 52
AF7
A
296 317Right-handed alpha
Helix 53
AF8
A
322 337Right-handed alpha
Helix 54
AF9
A
342 376Right-handed alpha
Helix 55
AG1
A
377 379Right-handed 310
Helix 56
AG2
A
381 413Right-handed alpha
Helix 57
AG3
A
418 428Right-handed alpha
Helix 58
AG4
A
432 446Right-handed alpha
Helix 59
AG5
A
448 481Right-handed alpha
Helix 60
AG6
A
487 515Right-handed alpha
Helix 61
AG7
A
524 529Right-handed alpha
Helix 62
AG8
A
574 600Right-handed alpha
Helix 63
AG9
A
605 621Right-handed alpha
Helix 64
AH1
A
634 639Right-handed alpha
Helix 65
AH2
A
641 654Right-handed alpha
Helix 66
AH3
A
668 677Right-handed alpha
Helix 67
AH4
A
677 704Right-handed alpha
Helix 68
AH5
A
724 750Right-handed alpha
Helix 69
AH6
A
755 761Right-handed alpha
Helix 70
AH7
A
761 783Right-handed alpha
Helix 71
AH8
A
799 806Right-handed 310
Helix 72
AH9
A
807 812Right-handed alpha
Helix 73
AI1
A
813 857Right-handed alpha
Helix 74
AI2
A
863 889Right-handed alpha
Helix 75
AI3
A
889 919Right-handed alpha
Helix 76
AI4
A
923 943Right-handed alpha
Helix 77
AI5
A
952 959Right-handed alpha
Helix 78
AI6
A
966 976Right-handed alpha
Helix 79
AI7
A
1043 1050Right-handed alpha
Helix 80
AI8
A
1069 1080Right-handed alpha
Helix 81
AI9
A
1085 1107Right-handed alpha
Helix 82
AJ1
A
1115 1123Right-handed alpha
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There are 8 sheets in PDB entry 8OTX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
979 982first strand
Strand 2
B
1063 1066anti-parallel
Strand 3
B
1000 1003anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
987 989first strand
Strand 2
B
1056 1059anti-parallel
Strand 3
B
1005 1010anti-parallel
Strand 4
B
1032 1037anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1125 1126first strand
Strand 2
B
1185 1188anti-parallel
Strand 3
B
1145 1149anti-parallel
Strand 4
B
1165 1166anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1153 1154first strand
Strand 2
B
1174 1175anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
979 982first strand
Strand 2
A
1063 1066anti-parallel
Strand 3
A
1000 1003anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
987 989first strand
Strand 2
A
1056 1059anti-parallel
Strand 3
A
1006 1009anti-parallel
Strand 4
A
1033 1036anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1125 1126first strand
Strand 2
A
1185 1188anti-parallel
Strand 3
A
1145 1149anti-parallel
Strand 4
A
1165 1166anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1153 1154first strand
Strand 2
A
1174 1175anti-parallel
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