Analysis of interatomic Contacts of Structural Units in PDB entry:
8OUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OUH entry

There are 4 chains in PDB entry 8OUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASP 43VAL 295
A
 ASP 43ARG 488
B
 ASP 43ARG 488
D
 ALA 21THR 142
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8OUH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
43 52Right-handed alpha
Helix 2
AA2
C
52 74Right-handed alpha
Helix 3
AA3
C
77 103Right-handed alpha
Helix 4
AA4
C
103 117Right-handed alpha
Helix 5
AA5
C
179 192Right-handed alpha
Helix 6
AA6
C
195 200Right-handed alpha
Helix 7
AA7
C
230 248Right-handed alpha
Helix 8
AA8
C
249 251Right-handed 310
Helix 9
AA9
C
252 292Right-handed alpha
Helix 10
AB1
A
44 52Right-handed alpha
Helix 11
AB2
A
52 75Right-handed alpha
Helix 12
AB3
A
82 118Right-handed alpha
Helix 13
AB4
A
120 154Right-handed alpha
Helix 14
AB5
A
179 191Right-handed alpha
Helix 15
AB6
A
197 200Right-handed 310
Helix 16
AB7
A
230 249Right-handed alpha
Helix 17
AB8
A
249 292Right-handed alpha
Helix 18
AB9
A
298 319Right-handed alpha
Helix 19
AC1
A
320 330Right-handed alpha
Helix 20
AC2
A
332 340Right-handed alpha
Helix 21
AC3
A
340 351Right-handed alpha
Helix 22
AC4
A
356 367Right-handed alpha
Helix 23
AC5
A
371 385Right-handed alpha
Helix 24
AC6
A
387 405Right-handed alpha
Helix 25
AC7
A
411 426Right-handed alpha
Helix 26
AC8
A
434 447Right-handed alpha
Helix 27
AC9
A
452 488Right-handed alpha
Helix 28
AD1
B
44 52Right-handed alpha
Helix 29
AD2
B
52 75Right-handed alpha
Helix 30
AD3
B
82 103Right-handed alpha
Helix 31
AD4
B
103 117Right-handed alpha
Helix 32
AD5
B
120 154Right-handed alpha
Helix 33
AD6
B
179 192Right-handed alpha
Helix 34
AD7
B
195 200Right-handed alpha
Helix 35
AD8
B
230 248Right-handed alpha
Helix 36
AD9
B
249 251Right-handed 310
Helix 37
AE1
B
252 291Right-handed alpha
Helix 38
AE2
B
294 319Right-handed alpha
Helix 39
AE3
B
319 330Right-handed alpha
Helix 40
AE4
B
332 340Right-handed alpha
Helix 41
AE5
B
340 351Right-handed alpha
Helix 42
AE6
B
356 367Right-handed alpha
Helix 43
AE7
B
371 386Right-handed alpha
Helix 44
AE8
B
387 405Right-handed alpha
Helix 45
AE9
B
410 428Right-handed alpha
Helix 46
AF1
B
433 447Right-handed alpha
Helix 47
AF2
B
452 456Right-handed 310
Helix 48
AF3
B
459 488Right-handed alpha
Helix 49
AF4
D
32 42Right-handed alpha
Helix 50
AF5
D
69 73Right-handed 310
Helix 51
AF6
D
118 142Right-handed alpha
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There are 4 sheets in PDB entry 8OUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
206 209first strand
Strand 2
C
220 223anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 227first strand
Strand 2
A
202 211anti-parallel
Strand 3
D
63 65anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 209first strand
Strand 2
B
220 227anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 81first strand
Strand 2
D
84 90anti-parallel
Strand 3
D
103 107anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il