Analysis of interatomic Contacts of Structural Units in PDB entry:
8OUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OUJ entry

There are 4 chains in PDB entry 8OUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 43ARG 488
B
 ASP 43ARG 488
D
 ALA 21THR 142
C
 ASP 43THR 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 8OUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 52Right-handed alpha
Helix 2
AA2
A
52 75Right-handed alpha
Helix 3
AA3
A
82 118Right-handed alpha
Helix 4
AA4
A
120 154Right-handed alpha
Helix 5
AA5
A
179 191Right-handed alpha
Helix 6
AA6
A
195 200Right-handed alpha
Helix 7
AA7
A
230 249Right-handed alpha
Helix 8
AA8
A
249 292Right-handed alpha
Helix 9
AA9
A
298 319Right-handed alpha
Helix 10
AB1
A
320 330Right-handed alpha
Helix 11
AB2
A
332 340Right-handed alpha
Helix 12
AB3
A
340 351Right-handed alpha
Helix 13
AB4
A
356 367Right-handed alpha
Helix 14
AB5
A
371 385Right-handed alpha
Helix 15
AB6
A
387 405Right-handed alpha
Helix 16
AB7
A
411 426Right-handed alpha
Helix 17
AB8
A
434 447Right-handed alpha
Helix 18
AB9
A
452 459Right-handed alpha
Helix 19
AC1
A
459 488Right-handed alpha
Helix 20
AC2
B
44 52Right-handed alpha
Helix 21
AC3
B
52 75Right-handed alpha
Helix 22
AC4
B
81 103Right-handed alpha
Helix 23
AC5
B
103 118Right-handed alpha
Helix 24
AC6
B
120 154Right-handed alpha
Helix 25
AC7
B
179 192Right-handed alpha
Helix 26
AC8
B
195 200Right-handed alpha
Helix 27
AC9
B
230 248Right-handed alpha
Helix 28
AD1
B
249 251Right-handed 310
Helix 29
AD2
B
252 291Right-handed alpha
Helix 30
AD3
B
294 319Right-handed alpha
Helix 31
AD4
B
319 330Right-handed alpha
Helix 32
AD5
B
332 340Right-handed alpha
Helix 33
AD6
B
340 351Right-handed alpha
Helix 34
AD7
B
356 367Right-handed alpha
Helix 35
AD8
B
371 386Right-handed alpha
Helix 36
AD9
B
387 405Right-handed alpha
Helix 37
AE1
B
410 428Right-handed alpha
Helix 38
AE2
B
434 447Right-handed alpha
Helix 39
AE3
B
452 456Right-handed 310
Helix 40
AE4
B
459 488Right-handed alpha
Helix 41
AE5
D
32 42Right-handed alpha
Helix 42
AE6
D
69 73Right-handed 310
Helix 43
AE7
D
118 142Right-handed alpha
Helix 44
AE8
C
44 52Right-handed alpha
Helix 45
AE9
C
52 73Right-handed alpha
Helix 46
AF1
C
90 103Right-handed alpha
Helix 47
AF2
C
104 118Right-handed alpha
Helix 48
AF3
C
125 154Right-handed alpha
Helix 49
AF4
C
182 192Right-handed alpha
Helix 50
AF5
C
197 201Right-handed 310
Helix 51
AF6
C
230 249Right-handed alpha
Helix 52
AF7
C
251 291Right-handed alpha
Helix 53
AF8
C
296 330Right-handed alpha
Helix 54
AF9
C
332 340Right-handed alpha
Helix 55
AG1
C
340 351Right-handed alpha
Helix 56
AG2
C
356 368Right-handed alpha
Helix 57
AG3
C
371 379Right-handed alpha
Helix 58
AG4
C
387 405Right-handed alpha
Helix 59
AG5
C
411 425Right-handed alpha
Helix 60
AG6
C
435 446Right-handed alpha
Helix 61
AG7
C
452 459Right-handed alpha
Helix 62
AG8
C
459 489Right-handed alpha
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There are 4 sheets in PDB entry 8OUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 227first strand
Strand 2
A
202 211anti-parallel
Strand 3
D
63 65anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 209first strand
Strand 2
B
220 227anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 81first strand
Strand 2
D
84 90anti-parallel
Strand 3
D
103 107anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
204 208first strand
Strand 2
C
221 225anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il