Analysis of interatomic Contacts of Structural Units in PDB entry:
8OUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OUY entry

There are 4 chains in PDB entry 8OUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4GLN 73
B
 MET 10THR 349
C
 GLY 2TRP 314
D
 GLY 20CYS 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 8OUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed alpha
Helix 2
AA2
A
12 21Right-handed alpha
Helix 3
AA3
A
26 32Right-handed alpha
Helix 4
AA4
A
34 43Right-handed alpha
Helix 5
AA5
A
45 58Right-handed alpha
Helix 6
AA6
A
67 72Right-handed alpha
Helix 7
AA7
B
20 30Right-handed alpha
Helix 8
AA8
B
34 38Right-handed 310
Helix 9
AA9
B
42 50Right-handed alpha
Helix 10
AB1
B
53 66Right-handed alpha
Helix 11
AB2
B
86 97Right-handed alpha
Helix 12
AB3
B
104 111Right-handed alpha
Helix 13
AB4
B
130 142Right-handed alpha
Helix 14
AB5
B
145 149Right-handed 310
Helix 15
AB6
B
165 188Right-handed alpha
Helix 16
AB7
B
191 199Right-handed alpha
Helix 17
AB8
B
200 206Right-handed alpha
Helix 18
AB9
B
215 233Right-handed alpha
Helix 19
AC1
B
252 258Right-handed alpha
Helix 20
AC2
B
263 276Right-handed alpha
Helix 21
AC3
B
302 308Right-handed 310
Helix 22
AC4
C
13 23Right-handed alpha
Helix 23
AC5
C
27 34Right-handed alpha
Helix 24
AC6
C
35 41Right-handed alpha
Helix 25
AC7
C
46 61Right-handed alpha
Helix 26
AC8
C
68 79Right-handed alpha
Helix 27
AC9
C
86 93Right-handed alpha
Helix 28
AD1
C
112 127Right-handed alpha
Helix 29
AD2
C
142 152Right-handed alpha
Helix 30
AD3
C
156 165Right-handed alpha
Helix 31
AD4
C
174 192Right-handed alpha
Helix 32
AD5
C
212 216Right-handed 310
Helix 33
AD6
C
221 242Right-handed alpha
Helix 34
AD7
C
265 270Right-handed alpha
Helix 35
AD8
D
23 28Right-handed alpha
Helix 36
AD9
D
53 67Right-handed alpha
Helix 37
AE1
D
68 72Right-handed 310
Helix 38
AE2
D
88 100Right-handed alpha
Helix 39
AE3
D
104 113Right-handed alpha
Helix 40
AE4
D
122 138Right-handed alpha
Helix 41
AE5
D
154 162Right-handed alpha
Helix 42
AE6
D
165 170Right-handed alpha
Helix 43
AE7
D
170 187Right-handed alpha
Helix 44
AE8
D
228 233Right-handed alpha
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There are 6 sheets in PDB entry 8OUY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
B
208 212anti-parallel
Strand 3
B
154 159parallel
Strand 4
B
236 242parallel
Strand 5
B
279 283parallel
Strand 6
B
120 125parallel
Strand 7
B
311 317parallel
Strand 8
B
322 328anti-parallel
Strand 9
B
335 338anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 342first strand
Strand 2
B
345 347anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 67first strand
Strand 2
D
115 119anti-parallel
Strand 3
D
78 82parallel
Strand 4
D
146 148parallel
Strand 5
D
191 194parallel
Strand 6
D
43 47parallel
Strand 7
D
237 243parallel
Strand 8
D
253 259anti-parallel
Strand 9
D
264 273anti-parallel
Strand 10
D
276 279anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 82first strand
Strand 2
C
97 98anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
167 171first strand
Strand 2
C
132 136parallel
Strand 3
C
202 206parallel
Strand 4
C
244 249parallel
Strand 5
C
102 106parallel
Strand 6
C
274 280parallel
Strand 7
C
291 297anti-parallel
Strand 8
C
307 309anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
252 253first strand
Strand 2
C
260 261anti-parallel
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