Analysis of interatomic Contacts of Structural Units in PDB entry:
8OV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OV0 entry

There is 1 chain in PDB entry 8OV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 3516PRO 3625
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 8OV0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
3547 3553Right-handed alpha
Helix 2
AA2
A
3578 3583Right-handed 310
Helix 3
AA3
A
3599 3601Right-handed 310
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There are 2 sheets in PDB entry 8OV0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3523 3526first strand
Strand 2
A
3611 3619anti-parallel
Strand 3
A
3563 3571anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3542 3546first strand
Strand 2
A
3593 3597anti-parallel
Strand 3
A
3586 3589anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il