Analysis of interatomic Contacts of Structural Units in PDB entry:
8OV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OV9 entry

There is 1 chain in PDB entry 8OV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8OV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
129 135Right-handed 310
Helix 2
AA2
A
138 152Right-handed alpha
Helix 3
AA3
A
169 180Right-handed alpha
Helix 4
AA4
A
190 200Right-handed alpha
Helix 5
AA5
A
212 221Right-handed alpha
Helix 6
AA6
A
231 241Right-handed alpha
Helix 7
AA7
A
268 273Right-handed alpha
Helix 8
AA8
A
281 303Right-handed alpha
Helix 9
AA9
A
318 328Right-handed alpha
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There are 5 sheets in PDB entry 8OV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
32 33anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 11first strand
Strand 2
A
25 28anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
44 53anti-parallel
Strand 3
A
80 90anti-parallel
Strand 4
A
100 106anti-parallel
Strand 5
A
119 121anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
44 53anti-parallel
Strand 3
A
334 338anti-parallel
Strand 4
A
310 314parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
A
183 188parallel
Strand 3
A
159 162parallel
Strand 4
A
223 228parallel
Strand 5
A
242 250parallel
Strand 6
A
276 279parallel
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