Analysis of interatomic Contacts of Structural Units in PDB entry:
8OVN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OVN entry

There are 2 chains in PDB entry 8OVN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4LEU 412
A
 VAL 416LEU 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8OVN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 14Right-handed alpha
Helix 2
AA2
A
38 56Right-handed alpha
Helix 3
AA3
A
73 78Right-handed alpha
Helix 4
AA4
A
91 96Right-handed alpha
Helix 5
AA5
A
121 126Right-handed 310
Helix 6
AA6
A
136 150Right-handed alpha
Helix 7
AA7
A
160 170Right-handed alpha
Helix 8
AA8
A
180 189Right-handed alpha
Helix 9
AA9
A
192 194Right-handed 310
Helix 10
AB1
A
216 233Right-handed alpha
Helix 11
AB2
A
234 245Right-handed alpha
Helix 12
AB3
A
351 357Right-handed 310
Helix 13
AB4
A
404 409Right-handed 310
Helix 14
AB5
A
416 420Right-handed 310
Helix 15
AB6
A
423 429Right-handed 310
Helix 16
AB7
A
430 435Right-handed alpha
Helix 17
AB8
A
504 513Right-handed alpha
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There are 4 sheets in PDB entry 8OVN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 66first strand
Strand 2
A
15 20parallel
Strand 3
A
83 84parallel
Strand 4
A
205 212anti-parallel
Strand 5
A
99 114anti-parallel
Strand 6
A
175 179anti-parallel
Strand 7
A
129 133parallel
Strand 8
A
154 158parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 66first strand
Strand 2
A
15 20parallel
Strand 3
A
83 84parallel
Strand 4
A
205 212anti-parallel
Strand 5
A
99 114anti-parallel
Strand 6
A
196 199anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
28 30anti-parallel
Strand 3
A
36 37anti-parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 259first strand
Strand 2
A
264 274anti-parallel
Strand 3
A
280 291anti-parallel
Strand 4
A
440 448anti-parallel
Strand 5
A
453 463anti-parallel
Strand 6
A
466 476anti-parallel
Strand 7
A
359 370parallel
Strand 8
A
373 384anti-parallel
Strand 9
A
389 396anti-parallel
Strand 10
A
321 331anti-parallel
Strand 11
A
303 312anti-parallel
Strand 12
A
252 259anti-parallel
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