Analysis of interatomic Contacts of Structural Units in PDB entry:
8OVW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OVW entry

There are 17 chains in PDB entry 8OVW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 221	ARG 321
B	GLU 218	GLY 324
D	T 127	A 153
H	SER 4	ILE 181
I	SER 2	SER 729
K	LYS 5	SER 237
L	PRO 2	PHE 242
N	GLU 4	GLN 451
O	GLN 120	ALA 364
P	ASN 98	ARG 369
Q	PRO 127	VAL 391
T	SER 269	LEU 360
U	THR 133	GLN 321
W	MET 1	GLN 89
Y	THR 2	LYS 238
Z	SER 3	ASN 153
E	T 2	A 28

There are139 helices in PDB entry 8OVW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	229	249	Right-handed alpha
Helix 2	AA2	A	255	320	Right-handed alpha
Helix 3	AA3	B	219	248	Right-handed alpha
Helix 4	AA4	B	255	324	Right-handed alpha
Helix 5	AA5	H	5	39	Right-handed alpha
Helix 6	AA6	H	46	74	Right-handed alpha
Helix 7	AA7	H	80	94	Right-handed alpha
Helix 8	AA8	H	96	133	Right-handed alpha
Helix 9	AA9	H	148	172	Right-handed alpha
Helix 10	AB1	I	3	13	Right-handed alpha
Helix 11	AB2	I	26	38	Right-handed alpha
Helix 12	AB3	I	41	55	Right-handed alpha
Helix 13	AB4	I	59	70	Right-handed alpha
Helix 14	AB5	I	78	89	Right-handed alpha
Helix 15	AB6	I	103	117	Right-handed alpha
Helix 16	AB7	I	131	139	Right-handed alpha
Helix 17	AB8	I	145	157	Right-handed alpha
Helix 18	AB9	I	164	176	Right-handed alpha
Helix 19	AC1	I	182	199	Right-handed alpha
Helix 20	AC2	I	204	211	Right-handed alpha
Helix 21	AC3	I	216	222	Right-handed alpha
Helix 22	AC4	I	227	241	Right-handed alpha
Helix 23	AC5	I	247	264	Right-handed alpha
Helix 24	AC6	I	265	267	Right-handed 310
Helix 25	AC7	I	295	302	Right-handed alpha
Helix 26	AC8	I	311	317	Right-handed alpha
Helix 27	AC9	I	332	337	Right-handed 310
Helix 28	AD1	I	339	348	Right-handed alpha
Helix 29	AD2	I	354	369	Right-handed alpha
Helix 30	AD3	I	378	387	Right-handed alpha
Helix 31	AD4	I	389	401	Right-handed alpha
Helix 32	AD5	I	402	409	Right-handed alpha
Helix 33	AD6	I	409	421	Right-handed alpha
Helix 34	AD7	I	422	424	Right-handed 310
Helix 35	AD8	I	431	450	Right-handed alpha
Helix 36	AD9	I	456	475	Right-handed alpha
Helix 37	AE1	I	478	494	Right-handed alpha
Helix 38	AE2	I	505	524	Right-handed alpha
Helix 39	AE3	I	531	535	Right-handed 310
Helix 40	AE4	I	538	548	Right-handed alpha
Helix 41	AE5	I	550	569	Right-handed alpha
Helix 42	AE6	I	577	593	Right-handed alpha
Helix 43	AE7	I	607	616	Right-handed alpha
Helix 44	AE8	I	639	654	Right-handed alpha
Helix 45	AE9	I	666	677	Right-handed alpha
Helix 46	AF1	I	677	684	Right-handed alpha
Helix 47	AF2	I	692	705	Right-handed alpha
Helix 48	AF3	I	711	721	Right-handed alpha
Helix 49	AF4	I	725	729	Right-handed 310
Helix 50	AF5	K	6	40	Right-handed alpha
Helix 51	AF6	K	49	58	Right-handed alpha
Helix 52	AF7	K	70	130	Right-handed alpha
Helix 53	AF8	K	138	159	Right-handed alpha
Helix 54	AF9	K	159	165	Right-handed alpha
Helix 55	AG1	K	166	169	Right-handed 310
Helix 56	AG2	K	170	187	Right-handed alpha
Helix 57	AG3	K	201	211	Right-handed alpha
Helix 58	AG4	L	19	28	Right-handed alpha
Helix 59	AG5	L	43	47	Right-handed 310
Helix 60	AG6	L	94	108	Right-handed alpha
Helix 61	AG7	L	117	128	Right-handed alpha
Helix 62	AG8	L	153	157	Right-handed 310
Helix 63	AG9	L	166	178	Right-handed alpha
Helix 64	AH1	L	182	187	Right-handed alpha
Helix 65	AH2	L	187	197	Right-handed alpha
Helix 66	AH3	L	229	240	Right-handed alpha
Helix 67	AH4	N	16	25	Right-handed alpha
Helix 68	AH5	N	28	43	Right-handed alpha
Helix 69	AH6	N	50	64	Right-handed alpha
Helix 70	AH7	N	67	78	Right-handed alpha
Helix 71	AH8	N	85	100	Right-handed alpha
Helix 72	AH9	N	101	103	Right-handed 310
Helix 73	AI1	N	124	137	Right-handed alpha
Helix 74	AI2	N	218	234	Right-handed alpha
Helix 75	AI3	N	250	258	Right-handed alpha
Helix 76	AI4	N	267	269	Right-handed 310
Helix 77	AI5	N	270	276	Right-handed alpha
Helix 78	AI6	N	289	294	Right-handed alpha
Helix 79	AI7	N	318	335	Right-handed alpha
Helix 80	AI8	N	408	419	Right-handed alpha
Helix 81	AI9	N	428	433	Right-handed alpha
Helix 82	AJ1	O	134	139	Right-handed alpha
Helix 83	AJ2	O	139	148	Right-handed alpha
Helix 84	AJ3	O	154	172	Right-handed alpha
Helix 85	AJ4	O	182	184	Right-handed 310
Helix 86	AJ5	O	245	253	Right-handed alpha
Helix 87	AJ6	O	254	256	Right-handed 310
Helix 88	AJ7	O	260	291	Right-handed alpha
Helix 89	AJ8	O	338	348	Right-handed alpha
Helix 90	AJ9	O	352	364	Right-handed alpha
Helix 91	AK1	P	99	112	Right-handed alpha
Helix 92	AK2	P	133	140	Right-handed alpha
Helix 93	AK3	P	149	160	Right-handed alpha
Helix 94	AK4	P	224	232	Right-handed alpha
Helix 95	AK5	P	236	266	Right-handed alpha
Helix 96	AK6	P	333	349	Right-handed alpha
Helix 97	AK7	P	350	363	Right-handed alpha
Helix 98	AK8	P	364	368	Right-handed 310
Helix 99	AK9	Q	129	141	Right-handed alpha
Helix 100	AL1	Q	155	181	Right-handed alpha
Helix 101	AL2	Q	181	190	Right-handed alpha
Helix 102	AL3	Q	192	220	Right-handed alpha
Helix 103	AL4	Q	233	290	Right-handed alpha
Helix 104	AL5	Q	297	299	Right-handed 310
Helix 105	AL6	Q	300	308	Right-handed alpha
Helix 106	AL7	Q	321	332	Right-handed alpha
Helix 107	AL8	Q	349	357	Right-handed alpha
Helix 108	AL9	Q	358	382	Right-handed alpha
Helix 109	AM1	Q	382	389	Right-handed alpha
Helix 110	AM2	T	274	283	Right-handed alpha
Helix 111	AM3	T	284	289	Right-handed alpha
Helix 112	AM4	T	294	316	Right-handed alpha
Helix 113	AM5	T	320	331	Right-handed alpha
Helix 114	AM6	T	336	344	Right-handed alpha
Helix 115	AM7	T	349	360	Right-handed alpha
Helix 116	AM8	U	134	149	Right-handed alpha
Helix 117	AM9	U	150	161	Right-handed alpha
Helix 118	AN1	U	164	232	Right-handed alpha
Helix 119	AN2	U	233	265	Right-handed alpha
Helix 120	AN3	U	286	299	Right-handed alpha
Helix 121	AN4	U	305	321	Right-handed alpha
Helix 122	AN5	W	2	15	Right-handed alpha
Helix 123	AN6	W	37	69	Right-handed alpha
Helix 124	AN7	W	74	88	Right-handed alpha
Helix 125	AN8	Y	3	16	Right-handed alpha
Helix 126	AN9	Y	17	30	Right-handed alpha
Helix 127	AO1	Y	36	50	Right-handed alpha
Helix 128	AO2	Y	55	84	Right-handed alpha
Helix 129	AO3	Y	94	102	Right-handed alpha
Helix 130	AO4	Y	109	119	Right-handed alpha
Helix 131	AO5	Y	137	186	Right-handed alpha
Helix 132	AO6	Y	191	219	Right-handed alpha
Helix 133	AO7	Y	222	238	Right-handed alpha
Helix 134	AO8	Z	4	13	Right-handed alpha
Helix 135	AO9	Z	15	20	Right-handed alpha
Helix 136	AP1	Z	21	29	Right-handed alpha
Helix 137	AP2	Z	35	84	Right-handed alpha
Helix 138	AP3	Z	86	127	Right-handed alpha
Helix 139	AP4	Z	134	153	Right-handed alpha

There are 16 sheets in PDB entry 8OVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	288	289	first strand
Strand 2	I	306	307	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	214	218	first strand
Strand 2	K	226	230	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	35	36	first strand
Strand 2	L	54	59	anti-parallel
Strand 3	L	72	77	anti-parallel
Strand 4	L	85	89	anti-parallel
Strand 5	L	3	10	anti-parallel
Strand 6	L	111	113	anti-parallel

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There are 14 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	35	36	first strand
Strand 2	L	54	59	anti-parallel
Strand 3	L	72	77	anti-parallel
Strand 4	L	85	89	anti-parallel
Strand 5	L	3	10	anti-parallel
Strand 6	L	220	223	anti-parallel
Strand 7	L	214	217	anti-parallel
Strand 8	L	205	210	anti-parallel
Strand 9	L	146	149	anti-parallel
Strand 10	L	160	164	anti-parallel
Strand 11	N	397	405	anti-parallel
Strand 12	N	386	392	anti-parallel
Strand 13	N	440	443	parallel
Strand 14	N	446	449	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	130	132	first strand
Strand 2	L	138	140	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	141	148	first strand
Strand 2	N	154	162	anti-parallel
Strand 3	N	200	205	anti-parallel
Strand 4	N	210	214	anti-parallel
Strand 5	N	105	113	anti-parallel
Strand 6	N	238	242	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	141	148	first strand
Strand 2	N	154	162	anti-parallel
Strand 3	N	200	205	anti-parallel
Strand 4	N	210	214	anti-parallel
Strand 5	N	105	113	anti-parallel
Strand 6	N	248	249	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	295	298	first strand
Strand 2	P	125	128	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	175	180	first strand
Strand 2	O	201	206	anti-parallel
Strand 3	O	220	226	anti-parallel
Strand 4	O	233	238	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	186	188	first strand
Strand 2	O	195	197	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	209	210	first strand
Strand 2	O	215	216	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	305	309	first strand
Strand 2	O	314	320	anti-parallel
Strand 3	O	323	329	anti-parallel
Strand 4	O	350	351	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	165	171	first strand
Strand 2	P	180	189	anti-parallel
Strand 3	P	174	175	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	165	171	first strand
Strand 2	P	180	189	anti-parallel
Strand 3	P	197	204	anti-parallel
Strand 4	P	214	220	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	270	274	first strand
Strand 2	P	279	285	anti-parallel
Strand 3	P	293	303	anti-parallel
Strand 4	P	318	327	anti-parallel
Strand 5	P	330	331	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	270	274	first strand
Strand 2	P	279	285	anti-parallel
Strand 3	P	293	303	anti-parallel
Strand 4	P	318	327	anti-parallel
Strand 5	Q	334	335	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OVW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OVW