Analysis of interatomic Contacts of Structural Units in PDB entry:
8OVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OVX entry

There are 6 chains in PDB entry 8OVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
O
 ASP 162ALA 364
P
 ARG 153MET 366
Q
 MET 277VAL 391
U
 GLY 233GLN 321
Y
 MET 1LYS 238
Z
 MET 1ASN 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8OVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
O
162 172Right-handed alpha
Helix 2
AA2
O
253 257Right-handed 310
Helix 3
AA3
O
260 291Right-handed alpha
Helix 4
AA4
O
353 364Right-handed alpha
Helix 5
AA5
P
154 160Right-handed alpha
Helix 6
AA6
P
226 231Right-handed alpha
Helix 7
AA7
P
232 234Right-handed 310
Helix 8
AA8
P
236 240Right-handed 310
Helix 9
AA9
P
244 263Right-handed alpha
Helix 10
AB1
P
333 348Right-handed alpha
Helix 11
AB2
P
349 363Right-handed alpha
Helix 12
AB3
Q
278 291Right-handed alpha
Helix 13
AB4
Q
321 332Right-handed alpha
Helix 14
AB5
Q
349 357Right-handed alpha
Helix 15
AB6
Q
358 380Right-handed alpha
Helix 16
AB7
Q
382 391Right-handed alpha
Helix 17
AB8
U
234 266Right-handed alpha
Helix 18
AB9
U
286 299Right-handed alpha
Helix 19
AC1
U
305 321Right-handed alpha
Helix 20
AC2
Y
2 31Right-handed alpha
Helix 21
AC3
Y
35 50Right-handed alpha
Helix 22
AC4
Y
51 54Right-handed 310
Helix 23
AC5
Y
55 86Right-handed alpha
Helix 24
AC6
Y
111 119Right-handed alpha
Helix 25
AC7
Y
137 186Right-handed alpha
Helix 26
AC8
Y
189 194Right-handed alpha
Helix 27
AC9
Y
196 219Right-handed alpha
Helix 28
AD1
Y
221 238Right-handed alpha
Helix 29
AD2
Z
2 13Right-handed alpha
Helix 30
AD3
Z
21 29Right-handed alpha
Helix 31
AD4
Z
37 71Right-handed alpha
Helix 32
AD5
Z
88 126Right-handed alpha
Helix 33
AD6
Z
131 153Right-handed alpha
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There are 5 sheets in PDB entry 8OVX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
175 179first strand
Strand 2
O
202 206anti-parallel
Strand 3
O
220 226anti-parallel
Strand 4
O
233 238anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
297 298first strand
Strand 2
O
307 308anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
315 320first strand
Strand 2
O
323 329anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
165 174first strand
Strand 2
P
181 189anti-parallel
Strand 3
P
197 205anti-parallel
Strand 4
P
215 220anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
270 273first strand
Strand 2
P
279 284anti-parallel
Strand 3
P
294 303anti-parallel
Strand 4
P
318 326anti-parallel
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