Analysis of interatomic Contacts of Structural Units in PDB entry:
8OW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OW8 entry

There is 1 chain in PDB entry 8OW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0SER 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8OW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 65Right-handed 310
Helix 2
AA2
A
86 105Right-handed alpha
Helix 3
AA3
A
107 120Right-handed alpha
Helix 4
AA4
A
134 136Right-handed 310
Helix 5
AA5
A
174 179Right-handed 310
Helix 6
AA6
A
200 202Right-handed 310
Helix 7
AA7
A
218 236Right-handed alpha
Helix 8
AA8
A
267 274Right-handed alpha
Helix 9
AA9
A
277 305Right-handed alpha
Helix 10
AB1
A
312 322Right-handed alpha
Helix 11
AB2
A
335 350Right-handed alpha
Helix 12
AB3
A
351 359Right-handed alpha
Helix 13
AB4
A
390 394Right-handed 310
Helix 14
AB5
A
399 403Right-handed 310
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There are 5 sheets in PDB entry 8OW8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 153first strand
Strand 2
A
138 142anti-parallel
Strand 3
A
18 22anti-parallel
Strand 4
A
42 48anti-parallel
Strand 5
A
51 57anti-parallel
Strand 6
A
156 160parallel
Strand 7
A
185 188parallel
Strand 8
A
169 172anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
33 34anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
193 198anti-parallel
Strand 3
A
374 377anti-parallel
Strand 4
A
410 412anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 247first strand
Strand 2
A
263 266anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
331 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il