Analysis of interatomic Contacts of Structural Units in PDB entry:
8OWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OWY entry

There are 2 chains in PDB entry 8OWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 41PRO 269
B
 SER 38LYS 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8OWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 49Right-handed alpha
Helix 2
AA2
A
93 101Right-handed alpha
Helix 3
AA3
A
112 122Right-handed alpha
Helix 4
AA4
A
141 145Right-handed 310
Helix 5
AA5
A
167 178Right-handed alpha
Helix 6
AA6
A
223 234Right-handed alpha
Helix 7
AA7
B
40 50Right-handed alpha
Helix 8
AA8
B
93 101Right-handed alpha
Helix 9
AA9
B
112 119Right-handed alpha
Helix 10
AB1
B
164 178Right-handed alpha
Helix 11
AB2
B
223 234Right-handed alpha
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There are 2 sheets in PDB entry 8OWY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 134first strand
Strand 2
A
105 110parallel
Strand 3
A
82 86parallel
Strand 4
A
151 157parallel
Strand 5
A
179 191parallel
Strand 6
A
260 267anti-parallel
Strand 7
A
237 244anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 134first strand
Strand 2
B
105 110parallel
Strand 3
B
82 86parallel
Strand 4
B
151 157parallel
Strand 5
B
179 190parallel
Strand 6
B
261 267anti-parallel
Strand 7
B
237 243anti-parallel
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