Analysis of interatomic Contacts of Structural Units in PDB entry:
8OXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OXM entry

There are 4 chains in PDB entry 8OXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
PRO 12THR 18
A
LEU 5VAL 3056
F
PRO 12THR 18
B
LEU 5VAL 3056
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are311 helices in PDB entry 8OXM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 17Right-handed alpha
Helix 2
AA2
A
19 34Right-handed alpha
Helix 3
AA3
A
35 42Right-handed alpha
Helix 4
AA4
A
57 74Right-handed alpha
Helix 5
AA5
A
88 109Right-handed alpha
Helix 6
AA6
A
116 129Right-handed alpha
Helix 7
AA7
A
134 148Right-handed alpha
Helix 8
AA8
A
152 159Right-handed alpha
Helix 9
AA9
A
160 176Right-handed alpha
Helix 10
AB1
A
183 202Right-handed alpha
Helix 11
AB2
A
206 208Right-handed 310
Helix 12
AB3
A
209 221Right-handed alpha
Helix 13
AB4
A
228 244Right-handed alpha
Helix 14
AB5
A
247 268Right-handed alpha
Helix 15
AB6
A
272 291Right-handed alpha
Helix 16
AB7
A
297 301Right-handed 310
Helix 17
AB8
A
305 324Right-handed alpha
Helix 18
AB9
A
342 357Right-handed alpha
Helix 19
AC1
A
392 403Right-handed alpha
Helix 20
AC2
A
409 423Right-handed alpha
Helix 21
AC3
A
424 427Right-handed 310
Helix 22
AC4
A
431 443Right-handed alpha
Helix 23
AC5
A
450 468Right-handed alpha
Helix 24
AC6
A
473 492Right-handed alpha
Helix 25
AC7
A
500 514Right-handed alpha
Helix 26
AC8
A
520 527Right-handed alpha
Helix 27
AC9
A
535 548Right-handed alpha
Helix 28
AD1
A
571 581Right-handed alpha
Helix 29
AD2
A
596 601Right-handed alpha
Helix 30
AD3
A
607 617Right-handed alpha
Helix 31
AD4
A
619 629Right-handed alpha
Helix 32
AD5
A
645 656Right-handed alpha
Helix 33
AD6
A
683 704Right-handed alpha
Helix 34
AD7
A
712 732Right-handed alpha
Helix 35
AD8
A
736 743Right-handed alpha
Helix 36
AD9
A
743 766Right-handed alpha
Helix 37
AE1
A
772 787Right-handed alpha
Helix 38
AE2
A
794 807Right-handed alpha
Helix 39
AE3
A
808 824Right-handed alpha
Helix 40
AE4
A
886 890Right-handed 310
Helix 41
AE5
A
891 912Right-handed alpha
Helix 42
AE6
A
919 931Right-handed alpha
Helix 43
AE7
A
940 954Right-handed alpha
Helix 44
AE8
A
962 971Right-handed alpha
Helix 45
AE9
A
972 980Right-handed alpha
Helix 46
AF1
A
983 995Right-handed alpha
Helix 47
AF2
A
997 1003Right-handed alpha
Helix 48
AF3
A
1008 1031Right-handed alpha
Helix 49
AF4
A
1035 1053Right-handed alpha
Helix 50
AF5
A
1070 1077Right-handed alpha
Helix 51
AF6
A
1078 1080Right-handed 310
Helix 52
AF7
A
1082 1093Right-handed alpha
Helix 53
AF8
A
1094 1097Right-handed 310
Helix 54
AF9
A
1112 1133Right-handed alpha
Helix 55
AG1
A
1143 1165Right-handed alpha
Helix 56
AG2
A
1168 1183Right-handed alpha
Helix 57
AG3
A
1186 1202Right-handed alpha
Helix 58
AG4
A
1205 1212Right-handed alpha
Helix 59
AG5
A
1213 1223Right-handed alpha
Helix 60
AG6
A
1235 1239Right-handed 310
Helix 61
AG7
A
1243 1261Right-handed alpha
Helix 62
AG8
A
1264 1273Right-handed alpha
Helix 63
AG9
A
1278 1286Right-handed alpha
Helix 64
AH1
A
1286 1295Right-handed alpha
Helix 65
AH2
A
1296 1299Right-handed 310
Helix 66
AH3
A
1305 1323Right-handed alpha
Helix 67
AH4
A
1331 1339Right-handed alpha
Helix 68
AH5
A
1340 1350Right-handed alpha
Helix 69
AH6
A
1382 1397Right-handed alpha
Helix 70
AH7
A
1403 1409Right-handed alpha
Helix 71
AH8
A
1412 1429Right-handed alpha
Helix 72
AH9
A
1431 1451Right-handed alpha
Helix 73
AI1
A
1457 1459Right-handed 310
Helix 74
AI2
A
1460 1478Right-handed alpha
Helix 75
AI3
A
1491 1509Right-handed alpha
Helix 76
AI4
A
1517 1524Right-handed alpha
Helix 77
AI5
A
1525 1528Right-handed 310
Helix 78
AI6
A
1531 1548Right-handed alpha
Helix 79
AI7
A
1552 1561Right-handed alpha
Helix 80
AI8
A
1568 1570Right-handed 310
Helix 81
AI9
A
1571 1577Right-handed alpha
Helix 82
AJ1
A
1578 1583Right-handed alpha
Helix 83
AJ2
A
1589 1604Right-handed alpha
Helix 84
AJ3
A
1610 1624Right-handed alpha
Helix 85
AJ4
A
1627 1635Right-handed alpha
Helix 86
AJ5
A
1638 1641Right-handed 310
Helix 87
AJ6
A
1642 1659Right-handed alpha
Helix 88
AJ7
A
1663 1677Right-handed alpha
Helix 89
AJ8
A
1693 1703Right-handed alpha
Helix 90
AJ9
A
1705 1722Right-handed alpha
Helix 91
AK1
A
1726 1741Right-handed alpha
Helix 92
AK2
A
1743 1754Right-handed alpha
Helix 93
AK3
A
1759 1765Right-handed alpha
Helix 94
AK4
A
1791 1796Right-handed alpha
Helix 95
AK5
A
1801 1816Right-handed alpha
Helix 96
AK6
A
1827 1832Right-handed alpha
Helix 97
AK7
A
1834 1852Right-handed alpha
Helix 98
AK8
A
1856 1874Right-handed alpha
Helix 99
AK9
A
1902 1918Right-handed alpha
Helix 100
AL1
A
1926 1931Right-handed alpha
Helix 101
AL2
A
1937 1948Right-handed alpha
Helix 102
AL3
A
1950 1974Right-handed alpha
Helix 103
AL4
A
1985 1997Right-handed alpha
Helix 104
AL5
A
2000 2012Right-handed alpha
Helix 105
AL6
A
2017 2022Right-handed 310
Helix 106
AL7
A
2028 2039Right-handed alpha
Helix 107
AL8
A
2041 2052Right-handed alpha
Helix 108
AL9
A
2056 2071Right-handed alpha
Helix 109
AM1
A
2074 2088Right-handed alpha
Helix 110
AM2
A
2092 2106Right-handed alpha
Helix 111
AM3
A
2123 2137Right-handed alpha
Helix 112
AM4
A
2140 2161Right-handed alpha
Helix 113
AM5
A
2168 2189Right-handed alpha
Helix 114
AM6
A
2194 2212Right-handed alpha
Helix 115
AM7
A
2216 2237Right-handed alpha
Helix 116
AM8
A
2241 2264Right-handed alpha
Helix 117
AM9
A
2268 2282Right-handed alpha
Helix 118
AN1
A
2289 2302Right-handed alpha
Helix 119
AN2
A
2304 2322Right-handed alpha
Helix 120
AN3
A
2327 2349Right-handed alpha
Helix 121
AN4
A
2352 2371Right-handed alpha
Helix 122
AN5
A
2376 2407Right-handed alpha
Helix 123
AN6
A
2407 2430Right-handed alpha
Helix 124
AN7
A
2435 2476Right-handed alpha
Helix 125
AN8
A
2480 2482Right-handed 310
Helix 126
AN9
A
2483 2492Right-handed alpha
Helix 127
AO1
A
2497 2507Right-handed alpha
Helix 128
AO2
A
2508 2511Right-handed 310
Helix 129
AO3
A
2512 2516Right-handed 310
Helix 130
AO4
A
2519 2525Right-handed alpha
Helix 131
AO5
A
2534 2552Right-handed alpha
Helix 132
AO6
A
2556 2565Right-handed alpha
Helix 133
AO7
A
2567 2573Right-handed alpha
Helix 134
AO8
A
2592 2613Right-handed alpha
Helix 135
AO9
A
2613 2633Right-handed alpha
Helix 136
AP1
A
2635 2639Right-handed 310
Helix 137
AP2
A
2651 2656Right-handed alpha
Helix 138
AP3
A
2722 2742Right-handed alpha
Helix 139
AP4
A
2742 2749Right-handed alpha
Helix 140
AP5
A
2776 2781Right-handed alpha
Helix 141
AP6
A
2786 2792Right-handed alpha
Helix 142
AP7
A
2797 2809Right-handed alpha
Helix 143
AP8
A
2812 2826Right-handed alpha
Helix 144
AP9
A
2832 2837Right-handed alpha
Helix 145
AQ1
A
2841 2867Right-handed alpha
Helix 146
AQ2
A
2872 2874Right-handed 310
Helix 147
AQ3
A
2911 2919Right-handed alpha
Helix 148
AQ4
A
2925 2941Right-handed alpha
Helix 149
AQ5
A
2941 2950Right-handed alpha
Helix 150
AQ6
A
3003 3019Right-handed alpha
Helix 151
AQ7
A
3027 3041Right-handed alpha
Helix 152
AQ8
A
3041 3047Right-handed alpha
Helix 153
AQ9
A
3049 3053Right-handed 310
Helix 154
AR1
B
6 17Right-handed alpha
Helix 155
AR2
B
19 34Right-handed alpha
Helix 156
AR3
B
35 42Right-handed alpha
Helix 157
AR4
B
57 74Right-handed alpha
Helix 158
AR5
B
88 109Right-handed alpha
Helix 159
AR6
B
116 129Right-handed alpha
Helix 160
AR7
B
134 148Right-handed alpha
Helix 161
AR8
B
152 159Right-handed alpha
Helix 162
AR9
B
160 176Right-handed alpha
Helix 163
AS1
B
183 202Right-handed alpha
Helix 164
AS2
B
206 208Right-handed 310
Helix 165
AS3
B
209 221Right-handed alpha
Helix 166
AS4
B
228 244Right-handed alpha
Helix 167
AS5
B
247 268Right-handed alpha
Helix 168
AS6
B
272 291Right-handed alpha
Helix 169
AS7
B
292 295Right-handed 310
Helix 170
AS8
B
297 301Right-handed 310
Helix 171
AS9
B
305 324Right-handed alpha
Helix 172
AT1
B
342 357Right-handed alpha
Helix 173
AT2
B
392 403Right-handed alpha
Helix 174
AT3
B
409 423Right-handed alpha
Helix 175
AT4
B
424 427Right-handed 310
Helix 176
AT5
B
431 443Right-handed alpha
Helix 177
AT6
B
450 468Right-handed alpha
Helix 178
AT7
B
473 493Right-handed alpha
Helix 179
AT8
B
497 499Right-handed 310
Helix 180
AT9
B
500 515Right-handed alpha
Helix 181
AU1
B
520 527Right-handed alpha
Helix 182
AU2
B
535 548Right-handed alpha
Helix 183
AU3
B
571 581Right-handed alpha
Helix 184
AU4
B
596 601Right-handed alpha
Helix 185
AU5
B
607 616Right-handed alpha
Helix 186
AU6
B
619 628Right-handed alpha
Helix 187
AU7
B
645 657Right-handed alpha
Helix 188
AU8
B
683 704Right-handed alpha
Helix 189
AU9
B
712 732Right-handed alpha
Helix 190
AV1
B
736 742Right-handed alpha
Helix 191
AV2
B
743 766Right-handed alpha
Helix 192
AV3
B
772 787Right-handed alpha
Helix 193
AV4
B
794 807Right-handed alpha
Helix 194
AV5
B
808 824Right-handed alpha
Helix 195
AV6
B
886 890Right-handed 310
Helix 196
AV7
B
891 911Right-handed alpha
Helix 197
AV8
B
912 914Right-handed 310
Helix 198
AV9
B
919 931Right-handed alpha
Helix 199
AW1
B
940 954Right-handed alpha
Helix 200
AW2
B
962 971Right-handed alpha
Helix 201
AW3
B
972 980Right-handed alpha
Helix 202
AW4
B
983 995Right-handed alpha
Helix 203
AW5
B
997 1002Right-handed alpha
Helix 204
AW6
B
1008 1031Right-handed alpha
Helix 205
AW7
B
1035 1053Right-handed alpha
Helix 206
AW8
B
1070 1077Right-handed alpha
Helix 207
AW9
B
1078 1080Right-handed 310
Helix 208
AX1
B
1082 1093Right-handed alpha
Helix 209
AX2
B
1094 1096Right-handed 310
Helix 210
AX3
B
1112 1133Right-handed alpha
Helix 211
AX4
B
1143 1165Right-handed alpha
Helix 212
AX5
B
1168 1183Right-handed alpha
Helix 213
AX6
B
1186 1202Right-handed alpha
Helix 214
AX7
B
1205 1212Right-handed alpha
Helix 215
AX8
B
1213 1225Right-handed alpha
Helix 216
AX9
B
1230 1234Right-handed 310
Helix 217
AY1
B
1235 1239Right-handed 310
Helix 218
AY2
B
1243 1262Right-handed alpha
Helix 219
AY3
B
1264 1275Right-handed alpha
Helix 220
AY4
B
1278 1286Right-handed alpha
Helix 221
AY5
B
1286 1295Right-handed alpha
Helix 222
AY6
B
1296 1299Right-handed 310
Helix 223
AY7
B
1305 1323Right-handed alpha
Helix 224
AY8
B
1327 1330Right-handed 310
Helix 225
AY9
B
1331 1339Right-handed alpha
Helix 226
AZ1
B
1339 1350Right-handed alpha
Helix 227
AZ2
B
1382 1397Right-handed alpha
Helix 228
AZ3
B
1403 1409Right-handed alpha
Helix 229
AZ4
B
1412 1429Right-handed alpha
Helix 230
AZ5
B
1431 1451Right-handed alpha
Helix 231
AZ6
B
1463 1478Right-handed alpha
Helix 232
AZ7
B
1491 1509Right-handed alpha
Helix 233
AZ8
B
1517 1524Right-handed alpha
Helix 234
AZ9
B
1525 1529Right-handed 310
Helix 235
BA1
B
1531 1548Right-handed alpha
Helix 236
BA2
B
1552 1561Right-handed alpha
Helix 237
BA3
B
1568 1570Right-handed 310
Helix 238
BA4
B
1571 1583Right-handed alpha
Helix 239
BA5
B
1589 1604Right-handed alpha
Helix 240
BA6
B
1610 1624Right-handed alpha
Helix 241
BA7
B
1627 1635Right-handed alpha
Helix 242
BA8
B
1638 1641Right-handed 310
Helix 243
BA9
B
1642 1659Right-handed alpha
Helix 244
BB1
B
1663 1677Right-handed alpha
Helix 245
BB2
B
1693 1703Right-handed alpha
Helix 246
BB3
B
1705 1722Right-handed alpha
Helix 247
BB4
B
1726 1741Right-handed alpha
Helix 248
BB5
B
1743 1754Right-handed alpha
Helix 249
BB6
B
1759 1765Right-handed alpha
Helix 250
BB7
B
1766 1768Right-handed 310
Helix 251
BB8
B
1791 1796Right-handed alpha
Helix 252
BB9
B
1801 1816Right-handed alpha
Helix 253
BC1
B
1827 1832Right-handed alpha
Helix 254
BC2
B
1834 1852Right-handed alpha
Helix 255
BC3
B
1856 1875Right-handed alpha
Helix 256
BC4
B
1902 1918Right-handed alpha
Helix 257
BC5
B
1926 1931Right-handed alpha
Helix 258
BC6
B
1937 1948Right-handed alpha
Helix 259
BC7
B
1950 1974Right-handed alpha
Helix 260
BC8
B
1985 1997Right-handed alpha
Helix 261
BC9
B
2000 2012Right-handed alpha
Helix 262
BD1
B
2018 2022Right-handed 310
Helix 263
BD2
B
2028 2039Right-handed alpha
Helix 264
BD3
B
2041 2052Right-handed alpha
Helix 265
BD4
B
2056 2071Right-handed alpha
Helix 266
BD5
B
2074 2088Right-handed alpha
Helix 267
BD6
B
2092 2106Right-handed alpha
Helix 268
BD7
B
2123 2137Right-handed alpha
Helix 269
BD8
B
2139 2161Right-handed alpha
Helix 270
BD9
B
2168 2189Right-handed alpha
Helix 271
BE1
B
2194 2212Right-handed alpha
Helix 272
BE2
B
2216 2237Right-handed alpha
Helix 273
BE3
B
2241 2264Right-handed alpha
Helix 274
BE4
B
2268 2282Right-handed alpha
Helix 275
BE5
B
2290 2302Right-handed alpha
Helix 276
BE6
B
2304 2322Right-handed alpha
Helix 277
BE7
B
2327 2349Right-handed alpha
Helix 278
BE8
B
2352 2371Right-handed alpha
Helix 279
BE9
B
2376 2406Right-handed alpha
Helix 280
BF1
B
2407 2430Right-handed alpha
Helix 281
BF2
B
2435 2476Right-handed alpha
Helix 282
BF3
B
2480 2482Right-handed 310
Helix 283
BF4
B
2483 2490Right-handed alpha
Helix 284
BF5
B
2497 2507Right-handed alpha
Helix 285
BF6
B
2508 2511Right-handed 310
Helix 286
BF7
B
2512 2516Right-handed 310
Helix 287
BF8
B
2519 2525Right-handed alpha
Helix 288
BF9
B
2534 2552Right-handed alpha
Helix 289
BG1
B
2556 2565Right-handed alpha
Helix 290
BG2
B
2567 2573Right-handed alpha
Helix 291
BG3
B
2592 2611Right-handed alpha
Helix 292
BG4
B
2613 2633Right-handed alpha
Helix 293
BG5
B
2635 2639Right-handed 310
Helix 294
BG6
B
2651 2656Right-handed alpha
Helix 295
BG7
B
2722 2742Right-handed alpha
Helix 296
BG8
B
2742 2749Right-handed alpha
Helix 297
BG9
B
2776 2781Right-handed alpha
Helix 298
BH1
B
2786 2792Right-handed alpha
Helix 299
BH2
B
2797 2809Right-handed alpha
Helix 300
BH3
B
2812 2826Right-handed alpha
Helix 301
BH4
B
2830 2832Right-handed 310
Helix 302
BH5
B
2833 2839Right-handed alpha
Helix 303
BH6
B
2841 2867Right-handed alpha
Helix 304
BH7
B
2911 2918Right-handed alpha
Helix 305
BH8
B
2921 2924Right-handed 310
Helix 306
BH9
B
2925 2941Right-handed alpha
Helix 307
BI1
B
2941 2950Right-handed alpha
Helix 308
BI2
B
3003 3019Right-handed alpha
Helix 309
BI3
B
3027 3041Right-handed alpha
Helix 310
BI4
B
3041 3047Right-handed alpha
Helix 311
BI5
B
3049 3053Right-handed 310
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There are 8 sheets in PDB entry 8OXM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1060 1063first strand
Strand 2
A
1066 1069anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2645 2646first strand
Strand 2
A
2689 2692anti-parallel
Strand 3
A
2700 2706anti-parallel
Strand 4
A
2683 2686anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2645 2646first strand
Strand 2
A
2689 2692anti-parallel
Strand 3
A
2700 2706anti-parallel
Strand 4
A
2711 2718anti-parallel
Strand 5
A
2764 2768anti-parallel
Strand 6
A
2757 2759anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2773 2775first strand
Strand 2
A
2876 2879anti-parallel
Strand 3
A
2885 2887anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1060 1063first strand
Strand 2
B
1066 1069anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2645 2646first strand
Strand 2
B
2689 2692anti-parallel
Strand 3
B
2700 2706anti-parallel
Strand 4
B
2683 2686anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2645 2646first strand
Strand 2
B
2689 2692anti-parallel
Strand 3
B
2700 2706anti-parallel
Strand 4
B
2711 2716anti-parallel
Strand 5
B
2765 2768anti-parallel
Strand 6
B
2757 2759anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2773 2775first strand
Strand 2
B
2876 2879anti-parallel
Strand 3
B
2885 2887anti-parallel
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