Analysis of interatomic Contacts of Structural Units in PDB entry:
8OYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OYX entry

There are 2 chains in PDB entry 8OYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 1ALA 232
B
GLY 1ALA 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 8OYX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 27Right-handed alpha
Helix 2
AA2
A
30 35Right-handed alpha
Helix 3
AA3
A
35 59Right-handed alpha
Helix 4
AA4
A
63 102Right-handed alpha
Helix 5
AA5
A
108 137Right-handed alpha
Helix 6
AA6
A
141 170Right-handed alpha
Helix 7
AA7
A
173 200Right-handed alpha
Helix 8
AA8
A
202 222Right-handed alpha
Helix 9
AA9
A
222 232Right-handed alpha
Helix 10
AB1
B
2 27Right-handed alpha
Helix 11
AB2
B
30 35Right-handed alpha
Helix 12
AB3
B
35 59Right-handed alpha
Helix 13
AB4
B
63 98Right-handed alpha
Helix 14
AB5
B
108 137Right-handed alpha
Helix 15
AB6
B
141 170Right-handed alpha
Helix 16
AB7
B
173 197Right-handed alpha
Helix 17
AB8
B
202 222Right-handed alpha
Helix 18
AB9
B
222 232Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8OYX

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il