Analysis of interatomic Contacts of Structural Units in PDB entry:
8OZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OZ1 entry

There is 1 chain in PDB entry 8OZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 24GLN 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8OZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 50Right-handed alpha
Helix 2
AA2
A
77 87Right-handed alpha
Helix 3
AA3
A
98 102Right-handed 310
Helix 4
AA4
A
110 127Right-handed alpha
Helix 5
AA5
A
137 141Right-handed 310
Helix 6
AA6
A
147 169Right-handed alpha
Helix 7
AA7
A
188 209Right-handed alpha
Helix 8
AA8
A
210 215Right-handed 310
Helix 9
AA9
A
223 225Right-handed 310
Helix 10
AB1
A
226 234Right-handed alpha
Helix 11
AB2
A
255 260Right-handed alpha
Helix 12
AB3
A
283 287Right-handed 310
Helix 13
AB4
A
292 307Right-handed alpha
Helix 14
AB5
A
308 311Right-handed 310
Helix 15
AB6
A
328 353Right-handed alpha
Helix 16
AB7
A
382 394Right-handed alpha
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There are 2 sheets in PDB entry 8OZ1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
91 94parallel
Strand 3
A
130 134parallel
Strand 4
A
176 179parallel
Strand 5
A
218 221parallel
Strand 6
A
246 252parallel
Strand 7
A
314 319parallel
Strand 8
A
355 361parallel
Strand 9
A
55 58parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
379 380anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il