Analysis of interatomic Contacts of Structural Units in PDB entry:
8OZQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8OZQ entry

There are 10 chains in PDB entry 8OZQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 59	TYR 116
B	SER 127	THR 563
D	ALA 578	PRO 982
F	SER 127	TYR 137
H	ALA 578	PRO 982
L	ALA 578	PRO 982
E	TYR 59	TYR 116
I	TYR 59	TYR 116
C	SER 127	THR 563
G	PRO 133	THR 563

There are 99 helices in PDB entry 8OZQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	59	101	Right-handed alpha
Helix 2	AA2	A	110	114	Right-handed 310
Helix 3	AA3	B	145	149	Right-handed 310
Helix 4	AA4	B	174	182	Right-handed alpha
Helix 5	AA5	B	185	205	Right-handed alpha
Helix 6	AA6	B	216	219	Right-handed 310
Helix 7	AA7	B	220	233	Right-handed alpha
Helix 8	AA8	B	270	276	Right-handed 310
Helix 9	AA9	B	288	293	Right-handed alpha
Helix 10	AB1	B	304	308	Right-handed 310
Helix 11	AB2	B	332	347	Right-handed alpha
Helix 12	AB3	B	355	359	Right-handed 310
Helix 13	AB4	B	378	383	Right-handed alpha
Helix 14	AB5	B	383	391	Right-handed alpha
Helix 15	AB6	B	402	406	Right-handed 310
Helix 16	AB7	B	471	478	Right-handed alpha
Helix 17	AB8	B	502	514	Right-handed alpha
Helix 18	AB9	B	514	526	Right-handed alpha
Helix 19	AC1	B	532	536	Right-handed 310
Helix 20	AC2	B	537	540	Right-handed 310
Helix 21	AC3	D	596	602	Right-handed 310
Helix 22	AC4	D	620	624	Right-handed alpha
Helix 23	AC5	D	624	629	Right-handed alpha
Helix 24	AC6	D	631	652	Right-handed alpha
Helix 25	AC7	D	656	660	Right-handed 310
Helix 26	AC8	D	661	670	Right-handed alpha
Helix 27	AC9	D	672	683	Right-handed alpha
Helix 28	AD1	D	869	876	Right-handed alpha
Helix 29	AD2	D	889	895	Right-handed alpha
Helix 30	AD3	D	897	903	Right-handed alpha
Helix 31	AD4	D	910	923	Right-handed alpha
Helix 32	AD5	D	926	942	Right-handed alpha
Helix 33	AD6	D	946	979	Right-handed alpha
Helix 34	AD7	H	596	602	Right-handed 310
Helix 35	AD8	H	620	624	Right-handed alpha
Helix 36	AD9	H	624	629	Right-handed alpha
Helix 37	AE1	H	631	652	Right-handed alpha
Helix 38	AE2	H	656	660	Right-handed 310
Helix 39	AE3	H	661	670	Right-handed alpha
Helix 40	AE4	H	672	683	Right-handed alpha
Helix 41	AE5	H	869	876	Right-handed alpha
Helix 42	AE6	H	889	895	Right-handed alpha
Helix 43	AE7	H	897	903	Right-handed alpha
Helix 44	AE8	H	910	923	Right-handed alpha
Helix 45	AE9	H	926	942	Right-handed alpha
Helix 46	AF1	H	946	979	Right-handed alpha
Helix 47	AF2	L	596	602	Right-handed 310
Helix 48	AF3	L	619	624	Right-handed alpha
Helix 49	AF4	L	624	629	Right-handed alpha
Helix 50	AF5	L	631	652	Right-handed alpha
Helix 51	AF6	L	656	660	Right-handed 310
Helix 52	AF7	L	661	670	Right-handed alpha
Helix 53	AF8	L	672	683	Right-handed alpha
Helix 54	AF9	L	869	876	Right-handed alpha
Helix 55	AG1	L	889	895	Right-handed alpha
Helix 56	AG2	L	897	903	Right-handed alpha
Helix 57	AG3	L	910	923	Right-handed alpha
Helix 58	AG4	L	926	942	Right-handed alpha
Helix 59	AG5	L	946	979	Right-handed alpha
Helix 60	AG6	E	60	101	Right-handed alpha
Helix 61	AG7	E	110	114	Right-handed 310
Helix 62	AG8	I	60	101	Right-handed alpha
Helix 63	AG9	I	110	114	Right-handed 310
Helix 64	AH1	C	145	147	Right-handed 310
Helix 65	AH2	C	175	182	Right-handed alpha
Helix 66	AH3	C	185	205	Right-handed alpha
Helix 67	AH4	C	216	219	Right-handed 310
Helix 68	AH5	C	220	233	Right-handed alpha
Helix 69	AH6	C	270	276	Right-handed 310
Helix 70	AH7	C	288	293	Right-handed alpha
Helix 71	AH8	C	304	308	Right-handed 310
Helix 72	AH9	C	332	347	Right-handed alpha
Helix 73	AI1	C	355	359	Right-handed 310
Helix 74	AI2	C	378	383	Right-handed alpha
Helix 75	AI3	C	383	391	Right-handed alpha
Helix 76	AI4	C	402	406	Right-handed 310
Helix 77	AI5	C	471	478	Right-handed alpha
Helix 78	AI6	C	502	514	Right-handed alpha
Helix 79	AI7	C	514	526	Right-handed alpha
Helix 80	AI8	C	532	536	Right-handed 310
Helix 81	AI9	C	537	540	Right-handed 310
Helix 82	AJ1	G	145	147	Right-handed 310
Helix 83	AJ2	G	175	182	Right-handed alpha
Helix 84	AJ3	G	185	205	Right-handed alpha
Helix 85	AJ4	G	216	219	Right-handed 310
Helix 86	AJ5	G	220	233	Right-handed alpha
Helix 87	AJ6	G	270	276	Right-handed 310
Helix 88	AJ7	G	288	293	Right-handed alpha
Helix 89	AJ8	G	304	308	Right-handed 310
Helix 90	AJ9	G	332	347	Right-handed alpha
Helix 91	AK1	G	355	359	Right-handed 310
Helix 92	AK2	G	378	383	Right-handed alpha
Helix 93	AK3	G	383	391	Right-handed alpha
Helix 94	AK4	G	402	406	Right-handed 310
Helix 95	AK5	G	471	478	Right-handed alpha
Helix 96	AK6	G	502	514	Right-handed alpha
Helix 97	AK7	G	514	526	Right-handed alpha
Helix 98	AK8	G	532	536	Right-handed 310
Helix 99	AK9	G	537	540	Right-handed 310

There are 35 sheets in PDB entry 8OZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	106	first strand
Strand 2	H	864	865	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	132	first strand
Strand 2	C	138	143	anti-parallel
Strand 3	D	828	832	anti-parallel
Strand 4	D	811	815	anti-parallel
Strand 5	D	801	805	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	141	first strand
Strand 2	C	129	132	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	498	501	first strand
Strand 2	B	235	239	anti-parallel
Strand 3	B	314	318	anti-parallel
Strand 4	B	542	545	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	251	first strand
Strand 2	B	301	302	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	283	first strand
Strand 2	B	457	460	anti-parallel
Strand 3	B	446	448	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	393	395	first strand
Strand 2	B	489	491	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	590	591	first strand
Strand 2	L	850	851	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	593	594	first strand
Strand 2	D	609	612	parallel
Strand 3	C	158	174	parallel
Strand 4	D	700	717	anti-parallel
Strand 5	D	684	695	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	616	619	first strand
Strand 2	C	158	174	parallel
Strand 3	D	769	777	parallel
Strand 4	D	755	765	anti-parallel
Strand 5	D	747	750	anti-parallel
Strand 6	D	720	725	anti-parallel
Strand 7	C	149	154	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	732	first strand
Strand 2	D	735	741	anti-parallel
Strand 3	D	790	795	anti-parallel
Strand 4	D	881	885	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	836	838	first strand
Strand 2	D	841	843	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	850	851	first strand
Strand 2	H	590	591	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	864	865	first strand
Strand 2	I	105	106	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	130	132	first strand
Strand 2	G	138	143	anti-parallel
Strand 3	H	828	832	anti-parallel
Strand 4	H	811	815	anti-parallel
Strand 5	H	801	805	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	593	594	first strand
Strand 2	H	609	612	parallel
Strand 3	G	158	174	parallel
Strand 4	H	700	717	anti-parallel
Strand 5	H	684	695	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	616	619	first strand
Strand 2	G	158	174	parallel
Strand 3	H	769	777	parallel
Strand 4	H	755	765	anti-parallel
Strand 5	H	747	750	anti-parallel
Strand 6	H	720	725	anti-parallel
Strand 7	G	149	154	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	728	732	first strand
Strand 2	H	735	741	anti-parallel
Strand 3	H	790	795	anti-parallel
Strand 4	H	881	885	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	836	838	first strand
Strand 2	H	841	843	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	850	851	first strand
Strand 2	L	590	591	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	593	594	first strand
Strand 2	L	611	612	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	684	695	first strand
Strand 2	L	700	709	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	720	722	first strand
Strand 2	L	747	750	anti-parallel
Strand 3	L	755	765	anti-parallel
Strand 4	L	769	777	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	728	732	first strand
Strand 2	L	735	741	anti-parallel
Strand 3	L	790	795	anti-parallel
Strand 4	L	881	885	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	801	805	first strand
Strand 2	L	811	815	anti-parallel
Strand 3	L	828	830	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	836	838	first strand
Strand 2	L	841	843	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	864	865	first strand
Strand 2	E	105	106	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	498	501	first strand
Strand 2	C	235	239	anti-parallel
Strand 3	C	314	318	anti-parallel
Strand 4	C	542	545	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	251	first strand
Strand 2	C	301	302	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	283	first strand
Strand 2	C	457	460	anti-parallel
Strand 3	C	446	448	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	393	395	first strand
Strand 2	C	489	491	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	498	501	first strand
Strand 2	G	235	239	anti-parallel
Strand 3	G	314	318	anti-parallel
Strand 4	G	542	545	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	250	251	first strand
Strand 2	G	301	302	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	282	283	first strand
Strand 2	G	457	460	anti-parallel
Strand 3	G	446	448	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	393	395	first strand
Strand 2	G	489	491	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8OZQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8OZQ