Analysis of interatomic Contacts of Structural Units in PDB entry:
8OZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8OZW entry

There are 2 chains in PDB entry 8OZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LYS 288
B
 ASN 3LYS 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8OZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 25Right-handed alpha
Helix 2
AA2
A
35 38Right-handed 310
Helix 3
AA3
A
39 44Right-handed alpha
Helix 4
AA4
A
52 59Right-handed alpha
Helix 5
AA5
A
69 78Right-handed alpha
Helix 6
AA6
A
96 110Right-handed alpha
Helix 7
AA7
A
122 126Right-handed 310
Helix 8
AA8
A
138 144Right-handed alpha
Helix 9
AA9
A
145 150Right-handed alpha
Helix 10
AB1
A
163 192Right-handed alpha
Helix 11
AB2
A
196 204Right-handed alpha
Helix 12
AB3
A
204 215Right-handed alpha
Helix 13
AB4
A
215 225Right-handed alpha
Helix 14
AB5
A
234 252Right-handed alpha
Helix 15
AB6
A
259 272Right-handed alpha
Helix 16
AB7
A
278 280Right-handed 310
Helix 17
AB8
A
281 287Right-handed alpha
Helix 18
AB9
B
12 25Right-handed alpha
Helix 19
AC1
B
35 38Right-handed 310
Helix 20
AC2
B
39 44Right-handed alpha
Helix 21
AC3
B
52 59Right-handed alpha
Helix 22
AC4
B
69 79Right-handed alpha
Helix 23
AC5
B
96 110Right-handed alpha
Helix 24
AC6
B
138 150Right-handed alpha
Helix 25
AC7
B
163 192Right-handed alpha
Helix 26
AC8
B
196 204Right-handed alpha
Helix 27
AC9
B
204 226Right-handed alpha
Helix 28
AD1
B
234 252Right-handed alpha
Helix 29
AD2
B
259 272Right-handed alpha
Helix 30
AD3
B
278 280Right-handed 310
Helix 31
AD4
B
281 287Right-handed alpha
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There are 2 sheets in PDB entry 8OZW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
29 32parallel
Strand 3
A
6 9parallel
Strand 4
A
62 65parallel
Strand 5
A
88 91parallel
Strand 6
A
113 120parallel
Strand 7
A
132 136anti-parallel
Strand 8
A
154 157parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
29 32parallel
Strand 3
B
6 9parallel
Strand 4
B
62 65parallel
Strand 5
B
88 91parallel
Strand 6
B
113 120parallel
Strand 7
B
132 136anti-parallel
Strand 8
B
154 157parallel
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