Analysis of interatomic Contacts of Structural Units in PDB entry:
8P02

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8P02 entry

There are 6 chains in PDB entry 8P02 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 14	ARG 527
B	GLU 14	ARG 527
C	GLU 14	ARG 527
D	GLU 14	ARG 527
E	GLU 14	ARG 527
F	GLU 14	ARG 527

There are114 helices in PDB entry 8P02. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	31	Right-handed alpha
Helix 2	AA2	A	46	54	Right-handed alpha
Helix 3	AA3	A	80	88	Right-handed alpha
Helix 4	AA4	A	92	105	Right-handed alpha
Helix 5	AA5	A	118	122	Right-handed 310
Helix 6	AA6	A	130	135	Right-handed alpha
Helix 7	AA7	A	159	162	Right-handed 310
Helix 8	AA8	A	188	197	Right-handed alpha
Helix 9	AA9	A	213	221	Right-handed alpha
Helix 10	AB1	A	234	244	Right-handed alpha
Helix 11	AB2	A	280	286	Right-handed alpha
Helix 12	AB3	A	334	357	Right-handed alpha
Helix 13	AB4	A	384	388	Right-handed 310
Helix 14	AB5	A	389	401	Right-handed alpha
Helix 15	AB6	A	419	430	Right-handed alpha
Helix 16	AB7	A	450	458	Right-handed alpha
Helix 17	AB8	A	498	503	Right-handed alpha
Helix 18	AB9	A	504	513	Right-handed alpha
Helix 19	AC1	A	517	526	Right-handed alpha
Helix 20	AC2	B	20	31	Right-handed alpha
Helix 21	AC3	B	46	54	Right-handed alpha
Helix 22	AC4	B	80	88	Right-handed alpha
Helix 23	AC5	B	92	105	Right-handed alpha
Helix 24	AC6	B	118	122	Right-handed 310
Helix 25	AC7	B	130	135	Right-handed alpha
Helix 26	AC8	B	159	162	Right-handed 310
Helix 27	AC9	B	188	197	Right-handed alpha
Helix 28	AD1	B	213	221	Right-handed alpha
Helix 29	AD2	B	234	244	Right-handed alpha
Helix 30	AD3	B	280	286	Right-handed alpha
Helix 31	AD4	B	334	357	Right-handed alpha
Helix 32	AD5	B	384	388	Right-handed 310
Helix 33	AD6	B	389	401	Right-handed alpha
Helix 34	AD7	B	419	430	Right-handed alpha
Helix 35	AD8	B	450	458	Right-handed alpha
Helix 36	AD9	B	498	503	Right-handed alpha
Helix 37	AE1	B	504	513	Right-handed alpha
Helix 38	AE2	B	517	526	Right-handed alpha
Helix 39	AE3	C	20	31	Right-handed alpha
Helix 40	AE4	C	46	54	Right-handed alpha
Helix 41	AE5	C	80	88	Right-handed alpha
Helix 42	AE6	C	92	105	Right-handed alpha
Helix 43	AE7	C	118	122	Right-handed 310
Helix 44	AE8	C	130	135	Right-handed alpha
Helix 45	AE9	C	159	162	Right-handed 310
Helix 46	AF1	C	188	197	Right-handed alpha
Helix 47	AF2	C	213	221	Right-handed alpha
Helix 48	AF3	C	234	244	Right-handed alpha
Helix 49	AF4	C	280	286	Right-handed alpha
Helix 50	AF5	C	334	357	Right-handed alpha
Helix 51	AF6	C	384	388	Right-handed 310
Helix 52	AF7	C	389	401	Right-handed alpha
Helix 53	AF8	C	419	430	Right-handed alpha
Helix 54	AF9	C	450	458	Right-handed alpha
Helix 55	AG1	C	498	503	Right-handed alpha
Helix 56	AG2	C	504	513	Right-handed alpha
Helix 57	AG3	C	517	526	Right-handed alpha
Helix 58	AG4	D	20	31	Right-handed alpha
Helix 59	AG5	D	46	54	Right-handed alpha
Helix 60	AG6	D	80	88	Right-handed alpha
Helix 61	AG7	D	92	105	Right-handed alpha
Helix 62	AG8	D	118	122	Right-handed 310
Helix 63	AG9	D	130	135	Right-handed alpha
Helix 64	AH1	D	159	162	Right-handed 310
Helix 65	AH2	D	188	197	Right-handed alpha
Helix 66	AH3	D	213	221	Right-handed alpha
Helix 67	AH4	D	234	244	Right-handed alpha
Helix 68	AH5	D	280	286	Right-handed alpha
Helix 69	AH6	D	334	357	Right-handed alpha
Helix 70	AH7	D	384	388	Right-handed 310
Helix 71	AH8	D	389	401	Right-handed alpha
Helix 72	AH9	D	419	430	Right-handed alpha
Helix 73	AI1	D	450	458	Right-handed alpha
Helix 74	AI2	D	498	503	Right-handed alpha
Helix 75	AI3	D	504	513	Right-handed alpha
Helix 76	AI4	D	517	526	Right-handed alpha
Helix 77	AI5	E	20	31	Right-handed alpha
Helix 78	AI6	E	46	54	Right-handed alpha
Helix 79	AI7	E	80	88	Right-handed alpha
Helix 80	AI8	E	92	105	Right-handed alpha
Helix 81	AI9	E	118	122	Right-handed 310
Helix 82	AJ1	E	130	135	Right-handed alpha
Helix 83	AJ2	E	159	162	Right-handed 310
Helix 84	AJ3	E	188	197	Right-handed alpha
Helix 85	AJ4	E	213	221	Right-handed alpha
Helix 86	AJ5	E	234	244	Right-handed alpha
Helix 87	AJ6	E	280	286	Right-handed alpha
Helix 88	AJ7	E	334	357	Right-handed alpha
Helix 89	AJ8	E	384	388	Right-handed 310
Helix 90	AJ9	E	389	401	Right-handed alpha
Helix 91	AK1	E	419	430	Right-handed alpha
Helix 92	AK2	E	450	458	Right-handed alpha
Helix 93	AK3	E	498	503	Right-handed alpha
Helix 94	AK4	E	504	513	Right-handed alpha
Helix 95	AK5	E	517	526	Right-handed alpha
Helix 96	AK6	F	20	31	Right-handed alpha
Helix 97	AK7	F	46	54	Right-handed alpha
Helix 98	AK8	F	80	88	Right-handed alpha
Helix 99	AK9	F	92	105	Right-handed alpha
Helix 100	AL1	F	118	122	Right-handed 310
Helix 101	AL2	F	130	135	Right-handed alpha
Helix 102	AL3	F	159	162	Right-handed 310
Helix 103	AL4	F	188	197	Right-handed alpha
Helix 104	AL5	F	213	221	Right-handed alpha
Helix 105	AL6	F	234	244	Right-handed alpha
Helix 106	AL7	F	280	286	Right-handed alpha
Helix 107	AL8	F	334	357	Right-handed alpha
Helix 108	AL9	F	384	388	Right-handed 310
Helix 109	AM1	F	389	401	Right-handed alpha
Helix 110	AM2	F	419	430	Right-handed alpha
Helix 111	AM3	F	450	458	Right-handed alpha
Helix 112	AM4	F	498	503	Right-handed alpha
Helix 113	AM5	F	504	513	Right-handed alpha
Helix 114	AM6	F	517	526	Right-handed alpha

There are 30 sheets in PDB entry 8P02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	60	62	parallel
Strand 3	A	72	75	anti-parallel
Strand 4	A	326	327	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	112	first strand
Strand 2	A	248	251	parallel
Strand 3	A	258	260	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	125	first strand
Strand 2	A	307	318	anti-parallel
Strand 3	A	265	278	anti-parallel
Strand 4	A	204	210	anti-parallel
Strand 5	A	153	157	anti-parallel
Strand 6	A	165	169	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	125	first strand
Strand 2	A	307	318	anti-parallel
Strand 3	A	179	181	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	365	first strand
Strand 2	A	375	380	anti-parallel
Strand 3	A	407	411	parallel
Strand 4	A	473	477	parallel
Strand 5	A	437	438	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	60	62	parallel
Strand 3	B	72	75	anti-parallel
Strand 4	B	326	327	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	112	first strand
Strand 2	B	248	251	parallel
Strand 3	B	258	260	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	125	first strand
Strand 2	B	307	318	anti-parallel
Strand 3	B	265	278	anti-parallel
Strand 4	B	204	210	anti-parallel
Strand 5	B	153	157	anti-parallel
Strand 6	B	165	169	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	125	first strand
Strand 2	B	307	318	anti-parallel
Strand 3	B	179	181	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	365	first strand
Strand 2	B	375	380	anti-parallel
Strand 3	B	407	411	parallel
Strand 4	B	473	477	parallel
Strand 5	B	437	438	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	60	62	parallel
Strand 3	C	72	75	anti-parallel
Strand 4	C	326	327	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	112	first strand
Strand 2	C	248	251	parallel
Strand 3	C	258	260	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	125	first strand
Strand 2	C	307	318	anti-parallel
Strand 3	C	265	278	anti-parallel
Strand 4	C	204	210	anti-parallel
Strand 5	C	153	157	anti-parallel
Strand 6	C	165	169	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	125	first strand
Strand 2	C	307	318	anti-parallel
Strand 3	C	179	181	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	365	first strand
Strand 2	C	375	380	anti-parallel
Strand 3	C	407	411	parallel
Strand 4	C	473	477	parallel
Strand 5	C	437	438	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	60	62	parallel
Strand 3	D	72	75	anti-parallel
Strand 4	D	326	327	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	112	first strand
Strand 2	D	248	251	parallel
Strand 3	D	258	260	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	125	first strand
Strand 2	D	307	318	anti-parallel
Strand 3	D	265	278	anti-parallel
Strand 4	D	204	210	anti-parallel
Strand 5	D	153	157	anti-parallel
Strand 6	D	165	169	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	125	first strand
Strand 2	D	307	318	anti-parallel
Strand 3	D	179	181	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	365	first strand
Strand 2	D	375	380	anti-parallel
Strand 3	D	407	411	parallel
Strand 4	D	473	477	parallel
Strand 5	D	437	438	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	37	first strand
Strand 2	E	60	62	parallel
Strand 3	E	72	75	anti-parallel
Strand 4	E	326	327	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	112	first strand
Strand 2	E	248	251	parallel
Strand 3	E	258	260	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	125	first strand
Strand 2	E	307	318	anti-parallel
Strand 3	E	265	278	anti-parallel
Strand 4	E	204	210	anti-parallel
Strand 5	E	153	157	anti-parallel
Strand 6	E	165	169	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	125	first strand
Strand 2	E	307	318	anti-parallel
Strand 3	E	179	181	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	361	365	first strand
Strand 2	E	375	380	anti-parallel
Strand 3	E	407	411	parallel
Strand 4	E	473	477	parallel
Strand 5	E	437	438	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	37	first strand
Strand 2	F	60	62	parallel
Strand 3	F	72	75	anti-parallel
Strand 4	F	326	327	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	112	first strand
Strand 2	F	248	251	parallel
Strand 3	F	258	260	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	125	first strand
Strand 2	F	307	318	anti-parallel
Strand 3	F	265	278	anti-parallel
Strand 4	F	204	210	anti-parallel
Strand 5	F	153	157	anti-parallel
Strand 6	F	165	169	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	125	first strand
Strand 2	F	307	318	anti-parallel
Strand 3	F	179	181	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	361	365	first strand
Strand 2	F	375	380	anti-parallel
Strand 3	F	407	411	parallel
Strand 4	F	473	477	parallel
Strand 5	F	437	438	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8P02

Analysis of interatomic Contacts of Structural Units in PDB entry:
8P02