Analysis of interatomic Contacts of Structural Units in PDB entry:
8P0G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8P0G entry

There are 5 chains in PDB entry 8P0G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 170	TYR 622
B	MET 1	PHE 710
C	ALA 7	ASN 254
V	A 1	C 14
R	G 20	G 24

There are 59 helices in PDB entry 8P0G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	176	184	Right-handed alpha
Helix 2	AA2	A	246	257	Right-handed alpha
Helix 3	AA3	A	270	272	Right-handed 310
Helix 4	AA4	A	273	286	Right-handed alpha
Helix 5	AA5	A	296	301	Right-handed alpha
Helix 6	AA6	A	304	316	Right-handed alpha
Helix 7	AA7	A	335	345	Right-handed alpha
Helix 8	AA8	A	362	381	Right-handed alpha
Helix 9	AA9	A	382	401	Right-handed alpha
Helix 10	AB1	A	485	493	Right-handed alpha
Helix 11	AB2	A	494	497	Right-handed 310
Helix 12	AB3	A	498	515	Right-handed alpha
Helix 13	AB4	A	540	557	Right-handed alpha
Helix 14	AB5	A	559	581	Right-handed alpha
Helix 15	AB6	A	592	599	Right-handed alpha
Helix 16	AB7	A	604	617	Right-handed alpha
Helix 17	AB8	B	13	20	Right-handed 310
Helix 18	AB9	B	33	49	Right-handed alpha
Helix 19	AC1	B	53	58	Right-handed alpha
Helix 20	AC2	B	66	70	Right-handed 310
Helix 21	AC3	B	80	95	Right-handed alpha
Helix 22	AC4	B	95	108	Right-handed alpha
Helix 23	AC5	B	109	113	Right-handed 310
Helix 24	AC6	B	114	121	Right-handed 310
Helix 25	AC7	B	134	151	Right-handed alpha
Helix 26	AC8	B	157	171	Right-handed alpha
Helix 27	AC9	B	216	225	Right-handed alpha
Helix 28	AD1	B	247	249	Right-handed 310
Helix 29	AD2	B	250	266	Right-handed alpha
Helix 30	AD3	B	277	287	Right-handed alpha
Helix 31	AD4	B	310	326	Right-handed alpha
Helix 32	AD5	B	328	344	Right-handed alpha
Helix 33	AD6	B	373	380	Right-handed 310
Helix 34	AD7	B	397	409	Right-handed alpha
Helix 35	AD8	B	432	451	Right-handed alpha
Helix 36	AD9	B	496	514	Right-handed alpha
Helix 37	AE1	B	518	537	Right-handed alpha
Helix 38	AE2	B	543	552	Right-handed alpha
Helix 39	AE3	B	558	562	Right-handed 310
Helix 40	AE4	B	575	583	Right-handed alpha
Helix 41	AE5	B	587	596	Right-handed alpha
Helix 42	AE6	B	646	666	Right-handed alpha
Helix 43	AE7	B	679	694	Right-handed alpha
Helix 44	AE8	B	698	708	Right-handed alpha
Helix 45	AE9	C	8	27	Right-handed alpha
Helix 46	AF1	C	27	32	Right-handed alpha
Helix 47	AF2	C	33	35	Right-handed 310
Helix 48	AF3	C	36	42	Right-handed alpha
Helix 49	AF4	C	52	62	Right-handed alpha
Helix 50	AF5	C	101	108	Right-handed alpha
Helix 51	AF6	C	115	123	Right-handed alpha
Helix 52	AF7	C	123	135	Right-handed alpha
Helix 53	AF8	C	163	165	Right-handed 310
Helix 54	AF9	C	166	176	Right-handed alpha
Helix 55	AG1	C	177	180	Right-handed 310
Helix 56	AG2	C	181	186	Right-handed alpha
Helix 57	AG3	C	189	200	Right-handed alpha
Helix 58	AG4	C	208	221	Right-handed alpha
Helix 59	AG5	C	234	245	Right-handed alpha

There are 16 sheets in PDB entry 8P0G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	242	first strand
Strand 2	A	423	431	anti-parallel
Strand 3	A	448	451	anti-parallel
Strand 4	A	472	478	anti-parallel
Strand 5	A	463	469	anti-parallel
Strand 6	A	261	264	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	242	first strand
Strand 2	A	423	431	anti-parallel
Strand 3	A	410	417	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	323	first strand
Strand 2	B	353	356	anti-parallel
Strand 3	B	362	364	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	445	first strand
Strand 2	A	481	484	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	526	528	first strand
Strand 2	A	537	539	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	584	586	first strand
Strand 2	B	460	463	anti-parallel
Strand 3	B	294	300	anti-parallel
Strand 4	B	423	430	anti-parallel
Strand 5	B	415	420	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	126	first strand
Strand 2	B	131	133	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	178	first strand
Strand 2	B	210	215	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	230	first strand
Strand 2	B	242	245	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	302	303	first strand
Strand 2	B	453	454	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	345	348	first strand
Strand 2	B	384	387	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	467	470	first strand
Strand 2	B	473	476	anti-parallel
Strand 3	B	479	482	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	69	first strand
Strand 2	C	97	99	anti-parallel
Strand 3	C	85	86	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	C	82	83	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	143	first strand
Strand 2	C	249	250	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	154	first strand
Strand 2	C	224	228	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8P0G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8P0G