Analysis of interatomic Contacts of Structural Units in PDB entry:
8P10

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8P10 entry

There are 29 chains in PDB entry 8P10 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	ASP 633	LEU 697
L	TRP 634	LEU 697
K	TRP 634	LEU 697
V	GLN 632	LEU 697
H	SER 631	LEU 697
Z	ASP 633	LEU 697
B	GLN 632	LEU 697
Y	ASP 633	LEU 697
G	GLN 632	LEU 697
C	TRP 634	LEU 697
T	TRP 634	LEU 697
P	TRP 634	LEU 697
M	SER 631	LEU 697
N	GLN 632	LEU 697
S	GLN 632	LEU 697
I	ASP 633	LEU 697
A	TRP 634	LEU 697
X	GLN 632	LEU 697
W	GLN 632	LEU 697
J	GLN 632	LEU 697
F	TRP 634	LEU 697
Q	ASP 633	LEU 697
R	GLN 632	LEU 697
U	TRP 634	LEU 697
a	TRP 634	LEU 697
b	TRP 634	LEU 697
O	GLN 632	LEU 697
D	TRP 634	LEU 697
c	ALA 234	ALA 243

There are 88 helices in PDB entry 8P10. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	658	668	Right-handed alpha
Helix 2	AA2	E	671	682	Right-handed alpha
Helix 3	AA3	E	686	697	Right-handed alpha
Helix 4	AA4	L	658	668	Right-handed alpha
Helix 5	AA5	L	671	682	Right-handed alpha
Helix 6	AA6	L	686	697	Right-handed alpha
Helix 7	AA7	K	658	668	Right-handed alpha
Helix 8	AA8	K	671	682	Right-handed alpha
Helix 9	AA9	K	686	696	Right-handed alpha
Helix 10	AB1	V	658	668	Right-handed alpha
Helix 11	AB2	V	671	682	Right-handed alpha
Helix 12	AB3	V	686	697	Right-handed alpha
Helix 13	AB4	H	658	668	Right-handed alpha
Helix 14	AB5	H	671	682	Right-handed alpha
Helix 15	AB6	H	686	697	Right-handed alpha
Helix 16	AB7	Z	658	668	Right-handed alpha
Helix 17	AB8	Z	671	682	Right-handed alpha
Helix 18	AB9	Z	686	697	Right-handed alpha
Helix 19	AC1	B	658	667	Right-handed alpha
Helix 20	AC2	B	671	682	Right-handed alpha
Helix 21	AC3	B	686	697	Right-handed alpha
Helix 22	AC4	Y	658	668	Right-handed alpha
Helix 23	AC5	Y	671	682	Right-handed alpha
Helix 24	AC6	Y	686	697	Right-handed alpha
Helix 25	AC7	G	658	667	Right-handed alpha
Helix 26	AC8	G	671	682	Right-handed alpha
Helix 27	AC9	G	683	685	Right-handed 310
Helix 28	AD1	G	686	697	Right-handed alpha
Helix 29	AD2	C	658	668	Right-handed alpha
Helix 30	AD3	C	671	682	Right-handed alpha
Helix 31	AD4	C	686	697	Right-handed alpha
Helix 32	AD5	T	658	667	Right-handed alpha
Helix 33	AD6	T	671	682	Right-handed alpha
Helix 34	AD7	T	686	697	Right-handed alpha
Helix 35	AD8	P	658	668	Right-handed alpha
Helix 36	AD9	P	671	682	Right-handed alpha
Helix 37	AE1	P	683	685	Right-handed 310
Helix 38	AE2	P	686	697	Right-handed alpha
Helix 39	AE3	M	658	667	Right-handed alpha
Helix 40	AE4	M	671	682	Right-handed alpha
Helix 41	AE5	M	686	697	Right-handed alpha
Helix 42	AE6	N	658	668	Right-handed alpha
Helix 43	AE7	N	671	682	Right-handed alpha
Helix 44	AE8	N	686	697	Right-handed alpha
Helix 45	AE9	S	658	667	Right-handed alpha
Helix 46	AF1	S	671	682	Right-handed alpha
Helix 47	AF2	S	686	697	Right-handed alpha
Helix 48	AF3	I	658	668	Right-handed alpha
Helix 49	AF4	I	671	682	Right-handed alpha
Helix 50	AF5	I	686	697	Right-handed alpha
Helix 51	AF6	A	658	668	Right-handed alpha
Helix 52	AF7	A	671	682	Right-handed alpha
Helix 53	AF8	A	683	685	Right-handed 310
Helix 54	AF9	A	686	697	Right-handed alpha
Helix 55	AG1	X	658	668	Right-handed alpha
Helix 56	AG2	X	671	682	Right-handed alpha
Helix 57	AG3	X	686	697	Right-handed alpha
Helix 58	AG4	W	658	667	Right-handed alpha
Helix 59	AG5	W	671	682	Right-handed alpha
Helix 60	AG6	W	686	697	Right-handed alpha
Helix 61	AG7	J	658	667	Right-handed alpha
Helix 62	AG8	J	671	682	Right-handed alpha
Helix 63	AG9	J	686	697	Right-handed alpha
Helix 64	AH1	F	658	667	Right-handed alpha
Helix 65	AH2	F	671	682	Right-handed alpha
Helix 66	AH3	F	683	685	Right-handed 310
Helix 67	AH4	F	686	697	Right-handed alpha
Helix 68	AH5	Q	658	667	Right-handed alpha
Helix 69	AH6	Q	671	682	Right-handed alpha
Helix 70	AH7	Q	686	697	Right-handed alpha
Helix 71	AH8	R	658	667	Right-handed alpha
Helix 72	AH9	R	671	682	Right-handed alpha
Helix 73	AI1	R	686	697	Right-handed alpha
Helix 74	AI2	U	658	668	Right-handed alpha
Helix 75	AI3	U	671	682	Right-handed alpha
Helix 76	AI4	U	686	697	Right-handed alpha
Helix 77	AI5	a	658	667	Right-handed alpha
Helix 78	AI6	a	671	682	Right-handed alpha
Helix 79	AI7	a	686	697	Right-handed alpha
Helix 80	AI8	b	658	667	Right-handed alpha
Helix 81	AI9	b	671	682	Right-handed alpha
Helix 82	AJ1	b	686	697	Right-handed alpha
Helix 83	AJ2	O	658	668	Right-handed alpha
Helix 84	AJ3	O	671	682	Right-handed alpha
Helix 85	AJ4	O	686	697	Right-handed alpha
Helix 86	AJ5	D	658	667	Right-handed alpha
Helix 87	AJ6	D	671	682	Right-handed alpha
Helix 88	AJ7	D	686	697	Right-handed alpha

There are 28 sheets in PDB entry 8P10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	636	639	first strand
Strand 2	E	645	648	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	636	639	first strand
Strand 2	L	645	648	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	636	639	first strand
Strand 2	K	645	648	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	636	639	first strand
Strand 2	V	645	648	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	636	639	first strand
Strand 2	H	645	648	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	636	639	first strand
Strand 2	Z	645	648	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	636	639	first strand
Strand 2	B	645	648	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	636	639	first strand
Strand 2	Y	645	648	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	638	639	first strand
Strand 2	G	645	646	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	636	639	first strand
Strand 2	C	645	648	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	636	639	first strand
Strand 2	T	645	648	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	636	638	first strand
Strand 2	P	646	648	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	637	639	first strand
Strand 2	M	645	647	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	636	639	first strand
Strand 2	N	645	648	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	637	639	first strand
Strand 2	S	645	647	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	636	639	first strand
Strand 2	I	645	648	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	636	639	first strand
Strand 2	A	645	648	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	636	639	first strand
Strand 2	X	645	648	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	636	639	first strand
Strand 2	W	645	648	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	636	639	first strand
Strand 2	J	645	648	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	636	639	first strand
Strand 2	F	645	648	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	636	638	first strand
Strand 2	Q	646	648	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	636	638	first strand
Strand 2	R	646	648	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	636	639	first strand
Strand 2	U	645	648	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	636	639	first strand
Strand 2	a	645	648	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	636	639	first strand
Strand 2	b	645	648	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	636	639	first strand
Strand 2	O	645	648	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	636	639	first strand
Strand 2	D	645	648	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8P10

Analysis of interatomic Contacts of Structural Units in PDB entry:
8P10